BLASTX 7.6.2
Query= RU12312 /QuerySize=359
(358 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157337655|emb|CAO22001.1| unnamed protein product [Vitis vini... 148 2e-034
gi|157348495|emb|CAO23387.1| unnamed protein product [Vitis vini... 119 5e-026
gi|195605772|gb|ACG24716.1| unknown [Zea mays] 109 9e-023
gi|195641316|gb|ACG40126.1| unknown [Zea mays] 109 9e-023
gi|15240145|ref|NP_196295.1| KH domain-containing protein / zinc... 102 1e-020
>gi|157337655|emb|CAO22001.1| unnamed protein product [Vitis vinifera]
Length = 234
Score = 148 bits (371), Expect = 2e-034
Identities = 66/86 (76%), Positives = 79/86 (91%)
Frame = -2
Query: 357 EHESDPKLRNIELEGTFDQIKDASAMVQDIIVNVSSAAGPHMRNPSMGASQGSSNFKTKL 178
+H+SDP LRNIELEGTFDQIK ASAMV+++IVN+SSA+GP MRNP+M AS ++NFKTKL
Sbjct: 145 DHDSDPNLRNIELEGTFDQIKQASAMVRELIVNISSASGPPMRNPAMQASAAANNFKTKL 204
Query: 177 CENFTKGQCTFGDRCHFAHGAEELRR 100
CENFTKG CTFG+RCHFAHGA+ELR+
Sbjct: 205 CENFTKGSCTFGERCHFAHGADELRK 230
>gi|157348495|emb|CAO23387.1| unnamed protein product [Vitis vinifera]
Length = 239
Score = 119 bits (298), Expect = 5e-026
Identities = 57/90 (63%), Positives = 73/90 (81%), Gaps = 4/90 (4%)
Frame = -2
Query: 351 ESDPKLRNIELEGTFDQIKDASAMVQDIIVNVSSAAGPHMRNPSM---GASQGSSNFKTK 181
+SDP LRNIELEGTF+QIK+ASAMV+++IVN+S+ G H R +M G + +SN+KTK
Sbjct: 151 DSDPNLRNIELEGTFEQIKEASAMVRELIVNISAMPG-HARTTAMPGGGQAPPASNYKTK 209
Query: 180 LCENFTKGQCTFGDRCHFAHGAEELRRGGM 91
LC+NFTKG CTFG+RCHFAHGA ELR+ +
Sbjct: 210 LCDNFTKGSCTFGERCHFAHGAGELRKSAI 239
>gi|195605772|gb|ACG24716.1| unknown [Zea mays]
Length = 234
Score = 109 bits (270), Expect = 9e-023
Identities = 53/86 (61%), Positives = 60/86 (69%), Gaps = 5/86 (5%)
Frame = -2
Query: 342 PKLRNIELEGTFDQIKDASAMVQDIIVNVSSAAGPHMRN-----PSMGASQGSSNFKTKL 178
P +NIELEGTFDQIK ASAMV ++IV +S P +N P A +SNFKTKL
Sbjct: 145 PNHKNIELEGTFDQIKHASAMVTELIVRISGKVPPQAKNNPGRGPGSHAGGPASNFKTKL 204
Query: 177 CENFTKGQCTFGDRCHFAHGAEELRR 100
CENF KG CTFGDRCHFAHG ELR+
Sbjct: 205 CENFNKGSCTFGDRCHFAHGESELRK 230
>gi|195641316|gb|ACG40126.1| unknown [Zea mays]
Length = 303
Score = 109 bits (270), Expect = 9e-023
Identities = 53/86 (61%), Positives = 60/86 (69%), Gaps = 5/86 (5%)
Frame = -2
Query: 342 PKLRNIELEGTFDQIKDASAMVQDIIVNVSSAAGPHMRN-----PSMGASQGSSNFKTKL 178
P +NIELEGTFDQIK ASAMV ++IV +S P +N P A +SNFKTKL
Sbjct: 214 PNHKNIELEGTFDQIKHASAMVTELIVRISGKVPPQAKNNPGRGPGSHAGGPASNFKTKL 273
Query: 177 CENFTKGQCTFGDRCHFAHGAEELRR 100
CENF KG CTFGDRCHFAHG ELR+
Sbjct: 274 CENFNKGSCTFGDRCHFAHGESELRK 299
>gi|15240145|ref|NP_196295.1| KH domain-containing protein / zinc finger (CCCH
type) family protein [Arabidopsis thaliana]
Length = 240
Score = 102 bits (252), Expect = 1e-020
Identities = 46/89 (51%), Positives = 60/89 (67%)
Frame = -2
Query: 357 EHESDPKLRNIELEGTFDQIKDASAMVQDIIVNVSSAAGPHMRNPSMGASQGSSNFKTKL 178
+HE DP L+ IELEGTF+QI AS MV+++I + S P G SN+KTK+
Sbjct: 151 DHERDPNLKIIELEGTFEQINVASGMVRELIGRLGSVKKPQGIGGPEGKPHPGSNYKTKI 210
Query: 177 CENFTKGQCTFGDRCHFAHGAEELRRGGM 91
C+ ++KG CT+GDRCHFAHG ELRR G+
Sbjct: 211 CDRYSKGNCTYGDRCHFAHGESELRRSGI 239
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 340,404,849,014
Number of Sequences: 7387702
Number of Extensions: 340404849014
Number of Successful Extensions: 174486074
Number of sequences better than 0.0: 0
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