Blast details for RU12456 (GenBank)


BLASTX 7.6.2

Query= RU12456 /QuerySize=843
        (842 letters)

Database: GenBank nr;
          7,387,702 sequences; 2,551,671,255 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|147776590|emb|CAN60802.1| hypothetical protein [Vitis vinifera]     306   2e-081
gi|15238194|ref|NP_196073.1| beta-ketoacyl-CoA synthase family p...    284   8e-075
gi|147780470|emb|CAN62551.1| hypothetical protein [Vitis vinifera]     266   2e-069
gi|157337386|emb|CAO21732.1| unnamed protein product [Vitis vini...    266   2e-069
gi|118486536|gb|ABK95107.1| unknown [Populus trichocarpa]              244   7e-063

>gi|147776590|emb|CAN60802.1| hypothetical protein [Vitis vinifera]

          Length = 460

 Score =  306 bits (782), Expect = 2e-081
 Identities = 149/238 (62%), Positives = 195/238 (81%), Gaps = 3/238 (1%)
 Frame = +1

Query: 130 MELLLKMCLVSLFFGFCCLFKSFLQRRDQCCYLLAYECYKAKEDLQLQTDTCAKIVMQNK 309
           MELLL + L+ L +      K  L  RDQ CY++ YEC+KA ED +L TDTCA IV++NK
Sbjct:   1 MELLLAVFLLPLSYAIILFCKKLLAWRDQRCYMVHYECFKASEDTKLNTDTCAGIVLRNK 60

Query: 310 NLGLEDFRFLLKTIVNSGIGEETSCPRNILQGRE--ATLADSLSDMDETIFDTLDKLFAR 483
           NLGLE+++FLL+TIV+SGIGEET  P+ +L G+E   +L DSLS+++E ++DTLDKLFA+
Sbjct:  61 NLGLEEYKFLLQTIVSSGIGEETYSPKIVLAGQEDSPSLKDSLSEIEEIMYDTLDKLFAK 120

Query: 484 YPSVSPSQIDILVVNVSMFSPSPSLTSRIVNRYKMREDIKTFNLSGMGCSASLVAVDVVQ 663
              VSPS+ID+LVVNVS+ SPSPSLT+RI+NRYKM+EDIK++NLSGMGCSASL+A+D+ +
Sbjct: 121 -TGVSPSEIDVLVVNVSLLSPSPSLTARIINRYKMKEDIKSYNLSGMGCSASLLAIDIAR 179

Query: 664 GLFKSYKDTYALVVSTESMAPFWYCGKEKSMMLTNWLFRLGGCSMLFTNRRYLKHPAI 837
            +FK +KD +A+VVSTESM P WYCG+EKSMML+N LFR+GGCSML TN+R +KH A+
Sbjct: 180 NIFKFHKDAFAVVVSTESMGPNWYCGREKSMMLSNCLFRVGGCSMLLTNKRAMKHRAL 237

>gi|15238194|ref|NP_196073.1| beta-ketoacyl-CoA synthase family protein
        [Arabidopsis thaliana]

          Length = 464

 Score =  284 bits (725), Expect = 8e-075
 Identities = 145/243 (59%), Positives = 193/243 (79%), Gaps = 7/243 (2%)
 Frame = +1

Query: 130 MEL--LLKMCLVSLFFGFCCLFKSFLQRRDQ-CCYLLAYECYKAKEDLQLQTDTCAKIVM 300
           MEL  L  + L+S  F F  +FK   +RR+Q  CY+L YECYK  E+ +L T+TCAK+V 
Sbjct:   1 MELFSLSSLLLLSTLFVF-YIFKFVFKRRNQRNCYMLHYECYKGMEERKLDTETCAKVVQ 59

Query: 301 QNKNLGLEDFRFLLKTIVNSGIGEETSCPRNILQGRE--ATLADSLSDMDETIFDTLDKL 474
           +NKNLGLE++RFLL+T+ +SGIGEET  PRN+L+GRE   TL D+ S+MDE +FDTLDKL
Sbjct:  60 RNKNLGLEEYRFLLRTMASSGIGEETYGPRNVLEGREDSPTLLDAHSEMDEIMFDTLDKL 119

Query: 475 FARYP-SVSPSQIDILVVNVSMFSPSPSLTSRIVNRYKMREDIKTFNLSGMGCSASLVAV 651
           F +   S+SPS IDILVVNVS+F+PSPSLTSR++NRYKMREDIK++NLSG+GCSAS++++
Sbjct: 120 FHKTKGSISPSDIDILVVNVSLFAPSPSLTSRVINRYKMREDIKSYNLSGLGCSASVISI 179

Query: 652 DVVQGLFKSYKDTYALVVSTESMAPFWYCGKEKSMMLTNWLFRLGGCSMLFTNRRYLKHP 831
           D+VQ +F++ ++  ALVVSTE+M P WYCGK++SMML+N LFR GG S+L TN    K+ 
Sbjct: 180 DIVQRMFETRENALALVVSTETMGPHWYCGKDRSMMLSNCLFRAGGSSVLLTNAARFKNQ 239

Query: 832 AIL 840
           A++
Sbjct: 240 ALM 242

>gi|147780470|emb|CAN62551.1| hypothetical protein [Vitis vinifera]

          Length = 467

 Score =  266 bits (679), Expect = 2e-069
 Identities = 129/239 (53%), Positives = 183/239 (76%), Gaps = 3/239 (1%)
 Frame = +1

Query: 130 MELLLKMCLVSLFFGFCCLFKSFLQRRDQCCYLLAYECYKAKEDLQLQTDTCAKIVMQNK 309
           ME ++ + L+ +F+ F  L+K    +RDQ CY+L Y+CYK  +D +L T+ C  ++ +NK
Sbjct:   1 MEAMVYLFLLPVFYLFFLLWKFIDGKRDQECYILDYQCYKPTDDRKLSTEFCGDMIRRNK 60

Query: 310 NLGLEDFRFLLKTIVNSGIGEETSCPRNILQGREA--TLADSLSDMDETIFDTLDKLFAR 483
           +LGL++++FLLK IVNSGIGEET  PRN+  G E   ++ D +S+MDE   D+++KL  R
Sbjct:  61 SLGLQEYKFLLKAIVNSGIGEETYGPRNVFSGNETHPSVLDGISEMDEFFNDSIEKLLDR 120

Query: 484 YPSVSPSQIDILVVNVSMFSPSPSLTSRIVNRYKMREDIKTFNLSGMGCSASLVAVDVVQ 663
              VSPS+ID LVVNVSM + +PSL  RI+NRYKMRE+IK FNL+GMGCSASL+++++VQ
Sbjct: 121 V-GVSPSEIDALVVNVSMITTAPSLAGRIINRYKMRENIKAFNLTGMGCSASLISINIVQ 179

Query: 664 GLFKSYKDTYALVVSTESMAPFWYCGKEKSMMLTNWLFRLGGCSMLFTNRRYLKHPAIL 840
            LFKSYK+ YALVV++ES++P WY G ++SM+L+N LFR GGC++L TN+R L+H A+L
Sbjct: 180 NLFKSYKNMYALVVTSESLSPNWYTGNDRSMILSNCLFRSGGCAVLLTNKRALRHRAML 238

>gi|157337386|emb|CAO21732.1| unnamed protein product [Vitis vinifera]

          Length = 470

 Score =  266 bits (679), Expect = 2e-069
 Identities = 129/239 (53%), Positives = 183/239 (76%), Gaps = 3/239 (1%)
 Frame = +1

Query: 130 MELLLKMCLVSLFFGFCCLFKSFLQRRDQCCYLLAYECYKAKEDLQLQTDTCAKIVMQNK 309
           ME ++ + L+ +F+ F  L+K    +RDQ CY+L Y+CYK  +D +L T+ C  ++ +NK
Sbjct:   1 MEAMVYLFLLPVFYLFFLLWKFIDGKRDQECYILDYQCYKPTDDRKLSTEFCGDMIRRNK 60

Query: 310 NLGLEDFRFLLKTIVNSGIGEETSCPRNILQGREA--TLADSLSDMDETIFDTLDKLFAR 483
           +LGL++++FLLK IVNSGIGEET  PRN+  G E   ++ D +S+MDE   D+++KL  R
Sbjct:  61 SLGLQEYKFLLKAIVNSGIGEETYGPRNVFSGNETHPSVLDGISEMDEFFNDSIEKLLDR 120

Query: 484 YPSVSPSQIDILVVNVSMFSPSPSLTSRIVNRYKMREDIKTFNLSGMGCSASLVAVDVVQ 663
              VSPS+ID LVVNVSM + +PSL  RI+NRYKMRE+IK FNL+GMGCSASL+++++VQ
Sbjct: 121 V-GVSPSEIDALVVNVSMITTAPSLAGRIINRYKMRENIKAFNLTGMGCSASLISINIVQ 179

Query: 664 GLFKSYKDTYALVVSTESMAPFWYCGKEKSMMLTNWLFRLGGCSMLFTNRRYLKHPAIL 840
            LFKSYK+ YALVV++ES++P WY G ++SM+L+N LFR GGC++L TN+R L+H A+L
Sbjct: 180 NLFKSYKNMYALVVTSESLSPNWYTGNDRSMILSNCLFRSGGCAVLLTNKRALRHRAML 238

>gi|118486536|gb|ABK95107.1| unknown [Populus trichocarpa]

          Length = 450

 Score =  244 bits (622), Expect = 7e-063
 Identities = 117/221 (52%), Positives = 169/221 (76%), Gaps = 3/221 (1%)
 Frame = +1

Query: 184 LFKSFLQRRDQCCYLLAYECYKAKEDLQLQTDTCAKIVMQNKNLGLEDFRFLLKTIVNSG 363
           L++   ++RD+ CY+L YEC+K  +D +L T+   +++ +NKNLGL +++FLL+ IV+SG
Sbjct:   2 LWRRIDRKRDRECYILDYECHKPTDDRKLDTECSGQVIRRNKNLGLNEYKFLLRAIVSSG 61

Query: 364 IGEETSCPRNILQGRE--ATLADSLSDMDETIFDTLDKLFARYPSVSPSQIDILVVNVSM 537
           IGE+T  PR I  G+E   TL D +S+M+E   D++ KL AR   ++P +ID+LVVNVSM
Sbjct:  62 IGEQTYGPRIIFNGQEENPTLQDLISEMEEFFHDSIGKLLAR-SGIAPKEIDVLVVNVSM 120

Query: 538 FSPSPSLTSRIVNRYKMREDIKTFNLSGMGCSASLVAVDVVQGLFKSYKDTYALVVSTES 717
            S  PSL + I+N YK+RED+K FNL+GMGCSASL++V++VQ +FK+YK+ YALVV++ES
Sbjct: 121 QSVVPSLPAMIINHYKLREDVKVFNLTGMGCSASLISVNIVQNIFKTYKNAYALVVTSES 180

Query: 718 MAPFWYCGKEKSMMLTNWLFRLGGCSMLFTNRRYLKHPAIL 840
           ++P WY G ++SM+L N LFR GGC+ML TN+R LKH A+L
Sbjct: 181 LSPNWYAGSDRSMILANCLFRSGGCAMLLTNKRALKHRAML 221

  Database: GenBank nr
    Posted date:  Wed Dec 03 02:04:20 2008
  Number of letters in database: 2,551,671,255
  Number of sequences in database:  7,387,702

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 340,404,849,014
Number of Sequences: 7387702
Number of Extensions: 340404849014
Number of Successful Extensions: 174486074
Number of sequences better than 0.0: 0