BLASTX 7.6.2
Query= RU12565 /QuerySize=234
(233 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|118140514|emb|CAL69645.1| putative NBS-LRR resistance protein... 146 5e-034
gi|73658506|emb|CAJ27118.1| putative TIR-NBS-LRR resistance prot... 137 3e-031
gi|46948258|gb|AAT07083.1| resistance protein [Rosa roxburghii] 131 3e-029
gi|46948252|gb|AAT07080.1| resistance protein [Rosa roxburghii] 129 6e-029
gi|47499351|gb|AAT28433.1| potential resistance protein [Rosa ro... 77 4e-013
>gi|118140514|emb|CAL69645.1| putative NBS-LRR resistance protein [Rosa hybrid
cultivar]
Length = 149
Score = 146 bits (368), Expect = 5e-034
Identities = 72/75 (96%), Positives = 73/75 (97%)
Frame = -3
Query: 231 ISRRDGIVALTKDLLCNVLKRMDVCDSEIRHRFHRKMVLIILDDVDKLEQLQALAGSNNW 52
ISRRDGIVALTKDLLCNVLKRMDVCDSE+RHRF RK VLIILDDVDKLEQLQALAGSNNW
Sbjct: 25 ISRRDGIVALTKDLLCNVLKRMDVCDSEVRHRFRRKKVLIILDDVDKLEQLQALAGSNNW 84
Query: 51 FGRGSRIIITTRDEQ 7
FGRGSRIIITTRDEQ
Sbjct: 85 FGRGSRIIITTRDEQ 99
>gi|73658506|emb|CAJ27118.1| putative TIR-NBS-LRR resistance protein [Rosa
hybrid cultivar]
Length = 157
Score = 137 bits (344), Expect = 3e-031
Identities = 69/75 (92%), Positives = 70/75 (93%)
Frame = -3
Query: 231 ISRRDGIVALTKDLLCNVLKRMDVCDSEIRHRFHRKMVLIILDDVDKLEQLQALAGSNNW 52
ISRRDGIVALTKDLLCNVLKRMD+ DSEIRHRF RK VLIILDDVDKLEQLQALAGS NW
Sbjct: 25 ISRRDGIVALTKDLLCNVLKRMDLYDSEIRHRFRRKKVLIILDDVDKLEQLQALAGSKNW 84
Query: 51 FGRGSRIIITTRDEQ 7
FGRGSRIIITTRD Q
Sbjct: 85 FGRGSRIIITTRDRQ 99
>gi|46948258|gb|AAT07083.1| resistance protein [Rosa roxburghii]
Length = 162
Score = 131 bits (327), Expect = 3e-029
Identities = 66/75 (88%), Positives = 69/75 (92%)
Frame = -3
Query: 231 ISRRDGIVALTKDLLCNVLKRMDVCDSEIRHRFHRKMVLIILDDVDKLEQLQALAGSNNW 52
ISRRDGIVALTK L+ NVLKRMDV DSE+RHRF RK VLIILDDVDKLEQLQ LAGSNNW
Sbjct: 31 ISRRDGIVALTKVLISNVLKRMDVYDSELRHRFRRKKVLIILDDVDKLEQLQVLAGSNNW 90
Query: 51 FGRGSRIIITTRDEQ 7
FGRGSRIIITTRD+Q
Sbjct: 91 FGRGSRIIITTRDKQ 105
>gi|46948252|gb|AAT07080.1| resistance protein [Rosa roxburghii]
Length = 162
Score = 129 bits (324), Expect = 6e-029
Identities = 65/75 (86%), Positives = 70/75 (93%)
Frame = -3
Query: 231 ISRRDGIVALTKDLLCNVLKRMDVCDSEIRHRFHRKMVLIILDDVDKLEQLQALAGSNNW 52
IS RDGIVALTKDLLC+V+KRMDV DSEI+HRF RK VLI+LDDVDKLEQLQALAGS NW
Sbjct: 31 ISGRDGIVALTKDLLCSVIKRMDVYDSEIKHRFCRKKVLIVLDDVDKLEQLQALAGSLNW 90
Query: 51 FGRGSRIIITTRDEQ 7
FGRGSRIIITTRD+Q
Sbjct: 91 FGRGSRIIITTRDKQ 105
>gi|47499351|gb|AAT28433.1| potential resistance protein [Rosa roxburghii]
Length = 168
Score = 77 bits (187), Expect = 4e-013
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = -3
Query: 147 IRHRFHRKMVLIILDDVDKLEQLQALAGSNNWFGRGSRIIITTRDEQ 7
I+ R K VL++LDDVDKLEQLQ LAGSN+WFGRGSRIIITTRD+Q
Sbjct: 65 IKERLGMKKVLVVLDDVDKLEQLQVLAGSNDWFGRGSRIIITTRDKQ 111
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 340,404,849,014
Number of Sequences: 7387702
Number of Extensions: 340404849014
Number of Successful Extensions: 174486074
Number of sequences better than 0.0: 0
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