BLASTX 7.6.2
Query= RU13223 /QuerySize=260
(259 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157360509|emb|CAO70072.1| unnamed protein product [Vitis vini... 106 7e-022
gi|15217814|ref|NP_174126.1| zinc finger (B-box type) family pro... 93 6e-018
gi|147785055|emb|CAN77743.1| hypothetical protein [Vitis vinifera] 92 1e-017
gi|157341167|emb|CAO49074.1| unnamed protein product [Vitis vini... 92 1e-017
gi|30685731|ref|NP_850211.1| zinc finger (B-box type) family pro... 91 3e-017
>gi|157360509|emb|CAO70072.1| unnamed protein product [Vitis vinifera]
Length = 431
Score = 106 bits (263), Expect = 7e-022
Identities = 48/60 (80%), Positives = 52/60 (86%), Gaps = 1/60 (1%)
Frame = +2
Query: 80 VSSKPATAGESIPCDFCSDQPAVLYCKADSAKLCLFCDQHVHGANLLSRKHVRSQICDNC 259
VS KP+ GE +PCDFCS Q AVLYC+ADSAKLCLFCDQHVH AN LSRKH+RSQICDNC
Sbjct: 2 VSPKPSN-GERVPCDFCSGQIAVLYCRADSAKLCLFCDQHVHSANALSRKHLRSQICDNC 60
>gi|15217814|ref|NP_174126.1| zinc finger (B-box type) family protein
[Arabidopsis thaliana]
Length = 433
Score = 93 bits (229), Expect = 6e-018
Identities = 39/54 (72%), Positives = 47/54 (87%)
Frame = +2
Query: 98 TAGESIPCDFCSDQPAVLYCKADSAKLCLFCDQHVHGANLLSRKHVRSQICDNC 259
++ E +PCDFC ++ AVL+C+AD+AKLCL CDQ VH ANLLSRKHVRSQICDNC
Sbjct: 2 SSSERVPCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNC 55
>gi|147785055|emb|CAN77743.1| hypothetical protein [Vitis vinifera]
Length = 438
Score = 92 bits (226), Expect = 1e-017
Identities = 39/58 (67%), Positives = 48/58 (82%), Gaps = 3/58 (5%)
Frame = +2
Query: 86 SKPATAGESIPCDFCSDQPAVLYCKADSAKLCLFCDQHVHGANLLSRKHVRSQICDNC 259
S+P+ A +PCDFC + AV++C+ADSAKLCL CD+HVH AN LSRKH+RSQICDNC
Sbjct: 7 SRPSAA---VPCDFCDSKTAVVHCRADSAKLCLLCDRHVHSANALSRKHLRSQICDNC 61
>gi|157341167|emb|CAO49074.1| unnamed protein product [Vitis vinifera]
Length = 468
Score = 92 bits (226), Expect = 1e-017
Identities = 39/58 (67%), Positives = 48/58 (82%), Gaps = 3/58 (5%)
Frame = +2
Query: 86 SKPATAGESIPCDFCSDQPAVLYCKADSAKLCLFCDQHVHGANLLSRKHVRSQICDNC 259
S+P+ A +PCDFC + AV++C+ADSAKLCL CD+HVH AN LSRKH+RSQICDNC
Sbjct: 7 SRPSAA---VPCDFCDSKTAVVHCRADSAKLCLLCDRHVHSANALSRKHLRSQICDNC 61
>gi|30685731|ref|NP_850211.1| zinc finger (B-box type) family protein
[Arabidopsis thaliana]
Length = 402
Score = 91 bits (223), Expect = 3e-017
Identities = 38/55 (69%), Positives = 46/55 (83%)
Frame = +2
Query: 95 ATAGESIPCDFCSDQPAVLYCKADSAKLCLFCDQHVHGANLLSRKHVRSQICDNC 259
+T + C+FC ++ AVL+C+AD+AKLCL CDQHVH ANLLSRKHVRSQICDNC
Sbjct: 4 STTESVVACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNC 58
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 340,404,849,014
Number of Sequences: 7387702
Number of Extensions: 340404849014
Number of Successful Extensions: 174486074
Number of sequences better than 0.0: 0
|