BLASTX 7.6.2
Query= RU13456 /QuerySize=276
(275 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157347398|emb|CAO18035.1| unnamed protein product [Vitis vini... 136 4e-031
gi|38230506|gb|AAR14274.1| predicted protein [Populus alba x Pop... 126 5e-028
gi|42569702|ref|NP_181288.3| PHD finger family protein [Arabidop... 121 2e-026
gi|3236235|gb|AAC23623.1| unknown protein [Arabidopsis thaliana] 121 2e-026
gi|110737508|dbj|BAF00696.1| hypothetical protein [Arabidopsis t... 121 2e-026
>gi|157347398|emb|CAO18035.1| unnamed protein product [Vitis vinifera]
Length = 719
Score = 136 bits (342), Expect = 4e-031
Identities = 64/90 (71%), Positives = 70/90 (77%), Gaps = 4/90 (4%)
Frame = +3
Query: 6 AGMSARRQPYRHIYISNGLTLHDIATSLANGQNLTTGASDGSDDMCAVCGHDTGKMILCD 185
AG +ARRQPYRHIY SNGLTLHDIA SLANGQN TTG SDDMC +CG D G +ILCD
Sbjct: 336 AGWAARRQPYRHIYTSNGLTLHDIAISLANGQNCTTG---DSDDMCTLCG-DGGDLILCD 391
Query: 186 GCPRAFHEACLNSEWIPESDWHCPNCRDNF 275
GCPRAFH ACL + +PE DW CP C +NF
Sbjct: 392 GCPRAFHPACLELQCLPEGDWRCPCCVENF 421
>gi|38230506|gb|AAR14274.1| predicted protein [Populus alba x Populus tremula]
Length = 868
Score = 126 bits (316), Expect = 5e-028
Identities = 60/86 (69%), Positives = 64/86 (74%), Gaps = 4/86 (4%)
Frame = +3
Query: 6 AGMSARRQPYRHIYISNGLTLHDIATSLANGQNLTTGASDGSDDMCAVCGHDTGKMILCD 185
AGMSARRQPYRHIY SN LTLHDIA SLANGQN+TTG DDMCA CG D G ++ C
Sbjct: 484 AGMSARRQPYRHIYTSNRLTLHDIAISLANGQNITTGI---GDDMCAECG-DGGDLMFCQ 539
Query: 186 GCPRAFHEACLNSEWIPESDWHCPNC 263
CPRAFH ACL+ PE WHCPNC
Sbjct: 540 SCPRAFHAACLDLHDTPEGAWHCPNC 565
>gi|42569702|ref|NP_181288.3| PHD finger family protein [Arabidopsis thaliana]
Length = 854
Score = 121 bits (302), Expect = 2e-026
Identities = 55/88 (62%), Positives = 69/88 (78%), Gaps = 4/88 (4%)
Frame = +3
Query: 6 AGMSARRQPYRHIYISNGLTLHDIATSLANGQNLTTGASDGSDDMCAVCGHDTGKMILCD 185
AGM+ARRQPYRHI+IS+GL+LHDIA SLANG +TTG SDDMC++CG D G ++LC
Sbjct: 454 AGMAARRQPYRHIFISSGLSLHDIAMSLANGHVITTG---DSDDMCSICG-DGGDLLLCA 509
Query: 186 GCPRAFHEACLNSEWIPESDWHCPNCRD 269
GCP+AFH ACL + +PE W+C +C D
Sbjct: 510 GCPQAFHTACLKFQSMPEGTWYCSSCND 537
>gi|3236235|gb|AAC23623.1| unknown protein [Arabidopsis thaliana]
Length = 825
Score = 121 bits (302), Expect = 2e-026
Identities = 55/88 (62%), Positives = 69/88 (78%), Gaps = 4/88 (4%)
Frame = +3
Query: 6 AGMSARRQPYRHIYISNGLTLHDIATSLANGQNLTTGASDGSDDMCAVCGHDTGKMILCD 185
AGM+ARRQPYRHI+IS+GL+LHDIA SLANG +TTG SDDMC++CG D G ++LC
Sbjct: 425 AGMAARRQPYRHIFISSGLSLHDIAMSLANGHVITTG---DSDDMCSICG-DGGDLLLCA 480
Query: 186 GCPRAFHEACLNSEWIPESDWHCPNCRD 269
GCP+AFH ACL + +PE W+C +C D
Sbjct: 481 GCPQAFHTACLKFQSMPEGTWYCSSCND 508
>gi|110737508|dbj|BAF00696.1| hypothetical protein [Arabidopsis thaliana]
Length = 534
Score = 121 bits (302), Expect = 2e-026
Identities = 55/88 (62%), Positives = 69/88 (78%), Gaps = 4/88 (4%)
Frame = +3
Query: 6 AGMSARRQPYRHIYISNGLTLHDIATSLANGQNLTTGASDGSDDMCAVCGHDTGKMILCD 185
AGM+ARRQPYRHI+IS+GL+LHDIA SLANG +TTG SDDMC++CG D G ++LC
Sbjct: 134 AGMAARRQPYRHIFISSGLSLHDIAMSLANGHVITTG---DSDDMCSICG-DGGDLLLCA 189
Query: 186 GCPRAFHEACLNSEWIPESDWHCPNCRD 269
GCP+AFH ACL + +PE W+C +C D
Sbjct: 190 GCPQAFHTACLKFQSMPEGTWYCSSCND 217
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 340,404,849,014
Number of Sequences: 7387702
Number of Extensions: 340404849014
Number of Successful Extensions: 174486074
Number of sequences better than 0.0: 0
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