BLASTX 7.6.2
Query= RU13588 /QuerySize=230
(229 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|127709419|gb|ABO28750.1| knotted1-like homeobox transcription... 112 1e-023
gi|157358451|emb|CAO66111.1| unnamed protein product [Vitis vini... 108 1e-022
gi|3327269|dbj|BAA31698.1| PKn1 [Ipomoea nil] 99 6e-020
gi|4589884|dbj|BAA76905.1| homeobox 22 [Nicotiana tabacum] 95 1e-018
gi|15991302|dbj|BAB69679.1| homeodomain transcription factor KNA... 91 2e-017
>gi|127709419|gb|ABO28750.1| knotted1-like homeobox transcription factor [Prunus
persica]
Length = 351
Score = 112 bits (278), Expect = 1e-023
Identities = 56/77 (72%), Positives = 62/77 (80%), Gaps = 8/77 (10%)
Frame = +1
Query: 1 LETYCDMLVKYKSDLARPFDEATTFLNKIETQLSNLC--------IRTLSDEGAVSSEEE 156
+ETYC+MLVKYKSDL+RPFDEATTFLNKIE QLSNLC IRTLSDEG SS+E+
Sbjct: 170 METYCEMLVKYKSDLSRPFDEATTFLNKIELQLSNLCTSSANASSIRTLSDEGGASSDED 229
Query: 157 FSGGELEVQEAQASGKD 207
FSGGE+EVQE Q G D
Sbjct: 230 FSGGEIEVQEGQQRGDD 246
>gi|157358451|emb|CAO66111.1| unnamed protein product [Vitis vinifera]
Length = 318
Score = 108 bits (269), Expect = 1e-022
Identities = 56/78 (71%), Positives = 65/78 (83%), Gaps = 5/78 (6%)
Frame = +1
Query: 1 LETYCDMLVKYKSDLARPFDEATTFLNKIETQLSNLC----IRTLSDEGAVSSEEEFSGG 168
+ETYCDML KYKSDLARPFDEATTFLNKIE QL NLC IR+L DE VSS+E+FSGG
Sbjct: 142 METYCDMLEKYKSDLARPFDEATTFLNKIEMQLGNLCNDASIRSLPDEAVVSSDEDFSGG 201
Query: 169 ELEVQEAQASGKDRDLQK 222
E EVQEAQ G+D++L++
Sbjct: 202 E-EVQEAQPRGEDQELKE 218
>gi|3327269|dbj|BAA31698.1| PKn1 [Ipomoea nil]
Length = 333
Score = 99 bits (246), Expect = 6e-020
Identities = 50/77 (64%), Positives = 62/77 (80%), Gaps = 5/77 (6%)
Frame = +1
Query: 1 LETYCDMLVKYKSDLARPFDEATTFLNKIETQLSNLCIRTLSDEGAVSS-EEEFSGGELE 177
+ETYCD+LVKYKSDL+RPFDEA TFLNKIETQLSNLC D+G VSS ++E+SGGE E
Sbjct: 163 METYCDILVKYKSDLSRPFDEAKTFLNKIETQLSNLC----KDDGVVSSDDDEYSGGEAE 218
Query: 178 VQEAQASGKDRDLQKWL 228
Q++ G+DR+L+ L
Sbjct: 219 EQDSAVKGEDRELKSRL 235
>gi|4589884|dbj|BAA76905.1| homeobox 22 [Nicotiana tabacum]
Length = 319
Score = 95 bits (235), Expect = 1e-018
Identities = 47/73 (64%), Positives = 58/73 (79%), Gaps = 4/73 (5%)
Frame = +1
Query: 1 LETYCDMLVKYKSDLARPFDEATTFLNKIETQLSNLCIRTLSDEGAVSSEEEFSGGELEV 180
+ETYCD+LVKYKSDL+RPFDEATTFL+KIE QLSNLC D+G VSS+EE S GE+E
Sbjct: 150 METYCDILVKYKSDLSRPFDEATTFLSKIELQLSNLC----KDDGGVSSDEELSCGEVEG 205
Query: 181 QEAQASGKDRDLQ 219
Q+A +D +L+
Sbjct: 206 QDASQRSEDNELK 218
>gi|15991302|dbj|BAB69679.1| homeodomain transcription factor KNAT6 [Arabidopsis
thaliana]
Length = 326
Score = 91 bits (225), Expect = 2e-017
Identities = 47/77 (61%), Positives = 59/77 (76%), Gaps = 6/77 (7%)
Frame = +1
Query: 1 LETYCDMLVKYKSDLARPFDEATTFLNKIETQLSNLC-----IRTLSDEGAVSSEEEFSG 165
+ETYCD+LVKYKSDLARPFDEAT FLNKIE QL NLC R +S++G +SS+EE SG
Sbjct: 147 METYCDILVKYKSDLARPFDEATCFLNKIEMQLRNLCTGVESARGVSEDGVISSDEELSG 206
Query: 166 GELEV-QEAQASGKDRD 213
G+ EV ++ + +DRD
Sbjct: 207 GDHEVAEDGRQRCEDRD 223
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 340,404,849,014
Number of Sequences: 7387702
Number of Extensions: 340404849014
Number of Successful Extensions: 174486074
Number of sequences better than 0.0: 0
|