Blast details for RU13772 (GenBank)


BLASTX 7.6.2

Query= RU13772 /QuerySize=260
        (259 letters)

Database: GenBank nr;
          7,387,702 sequences; 2,551,671,255 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|157347945|emb|CAO22532.1| unnamed protein product [Vitis vini...     68   2e-010
gi|18379060|ref|NP_563676.1| splicing factor Prp18 family protei...     57   3e-007

>gi|157347945|emb|CAO22532.1| unnamed protein product [Vitis vinifera]

          Length = 398

 Score =  68 bits (164), Expect = 2e-010
 Identities = 37/67 (55%), Positives = 49/67 (73%), Gaps = 3/67 (4%)
 Frame = -2

Query: 216 LKKEIEAKRQRLAEAATGTGSKRYFNRAEMEKKQIQKKREEEKRELEAKAKSKRQSAASS 37
           LK+E+  KRQ LA+ A   G KR+F R+E+E++ IQK RE+EKRELEAKA       ASS
Sbjct:   4 LKQELLKKRQSLAQEA---GGKRFFKRSEIEQRNIQKLREQEKRELEAKALRHNNGTASS 60

Query:  36 SSSAAAA 16
           S++AAA+
Sbjct:  61 STAAAAS 67

>gi|18379060|ref|NP_563676.1| splicing factor Prp18 family protein [Arabidopsis
        thaliana]

          Length = 420

 Score =  57 bits (137), Expect = 3e-007
 Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
 Frame = -2

Query: 216 LKKEIEAKRQRLAEAATGTGSKRYFNRAEMEKKQIQKKREEEKRELEAKAKSKRQSAASS 37
           L++EI  KR+ LAE    +G K++F R+E+E+K+IQK REEE+RE E KA+ +  +AAS 
Sbjct:   4 LREEILKKRKSLAEE---SGGKKFFKRSEIEQKKIQKLREEERREHELKAQRRAAAAASG 60

Query:  36 SSSAAAATGGDS 1
               ++ +   S
Sbjct:  61 GDGKSSGSAPGS 72

  Database: GenBank nr
    Posted date:  Wed Dec 03 02:04:20 2008
  Number of letters in database: 2,551,671,255
  Number of sequences in database:  7,387,702

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 340,404,849,014
Number of Sequences: 7387702
Number of Extensions: 340404849014
Number of Successful Extensions: 174486074
Number of sequences better than 0.0: 0