BLASTX 7.6.2
Query= RU14639 /QuerySize=427
(426 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|147798190|emb|CAN73746.1| hypothetical protein [Vitis vinifera] 128 1e-028
gi|157352695|emb|CAO44510.1| unnamed protein product [Vitis vini... 128 1e-028
gi|115441383|ref|NP_001044971.1| Os01g0876800 [Oryza sativa (jap... 86 7e-016
gi|42562492|ref|NP_174613.2| RNA recognition motif (RRM)-contain... 67 3e-010
>gi|147798190|emb|CAN73746.1| hypothetical protein [Vitis vinifera]
Length = 269
Score = 128 bits (321), Expect = 1e-028
Identities = 84/145 (57%), Positives = 94/145 (64%), Gaps = 30/145 (20%)
Frame = +1
Query: 1 GGGRNFRVMAGSIFQAAGGVGVGVGSGFAAASAATAFPAHHHYAAIQQGIPAAAAAAYNL 180
GGGRNFRVM FQ G GVG+ F +A+ FP HY AIQQGIP YNL
Sbjct: 106 GGGRNFRVMGS--FQT--GFQGGVGTAFPSAA---TFP---HY-AIQQGIP------YNL 148
Query: 181 YATAGYSPYSPDYTYPTNYYGLYGGGATSQYPVYGT--GGMLTGGAAAAAFYPYLQYGEA 354
Y GYSPYSPDYTYPT+YY +Y GGA +QYPVYG GGM+TG A AAFYPYLQ+GE
Sbjct: 149 Y---GYSPYSPDYTYPTSYYSVY-GGAAAQYPVYGAGPGGMMTG--AGAAFYPYLQFGEG 202
Query: 355 ANGGAAAYTTSGAQNVGYG-GIQYP 426
+ G AA SG G G G+QYP
Sbjct: 203 SGGAAA----SGGYTSGQGYGVQYP 223
>gi|157352695|emb|CAO44510.1| unnamed protein product [Vitis vinifera]
Length = 264
Score = 128 bits (321), Expect = 1e-028
Identities = 84/145 (57%), Positives = 94/145 (64%), Gaps = 30/145 (20%)
Frame = +1
Query: 1 GGGRNFRVMAGSIFQAAGGVGVGVGSGFAAASAATAFPAHHHYAAIQQGIPAAAAAAYNL 180
GGGRNFRVM FQ G GVG+ F +A+ FP HY AIQQGIP YNL
Sbjct: 106 GGGRNFRVMGS--FQT--GFQGGVGTAFPSAA---TFP---HY-AIQQGIP------YNL 148
Query: 181 YATAGYSPYSPDYTYPTNYYGLYGGGATSQYPVYGT--GGMLTGGAAAAAFYPYLQYGEA 354
Y GYSPYSPDYTYPT+YY +Y GGA +QYPVYG GGM+TG A AAFYPYLQ+GE
Sbjct: 149 Y---GYSPYSPDYTYPTSYYSVY-GGAAAQYPVYGAGPGGMMTG--AGAAFYPYLQFGEG 202
Query: 355 ANGGAAAYTTSGAQNVGYG-GIQYP 426
+ G AA SG G G G+QYP
Sbjct: 203 SGGAAA----SGGYTSGQGYGVQYP 223
>gi|115441383|ref|NP_001044971.1| Os01g0876800 [Oryza sativa (japonica
cultivar-group)]
Length = 300
Score = 86 bits (210), Expect = 7e-016
Identities = 57/131 (43%), Positives = 74/131 (56%), Gaps = 38/131 (29%)
Frame = +1
Query: 67 GVGSGFAAASAATAFPAH---HHYAAIQQGIPAAAAAAYNLYATAGYSPYSPDYTYPTNY 237
G+ G A AFP+H HY AI QG+P Y++Y GYSPYSPDY+YPTNY
Sbjct: 122 GIQGGLGA-----AFPSHATFPHY-AIPQGLP------YHVY---GYSPYSPDYSYPTNY 166
Query: 238 YGLYGGGATSQYPVYG--------TGGMLTGGAAAAAFYPYLQYGEAANGGAAAYTTSGA 393
Y +YGG +QYP YG GM+TG ++ FYPY Q+G+ + + TT+ A
Sbjct: 167 YNIYGG---AQYPFYGAAAAAAAAAAGMVTG---SSPFYPYFQFGQ-----SGSTTTNYA 215
Query: 394 QNVGYGGIQYP 426
GY +QYP
Sbjct: 216 SGQGY-NLQYP 225
>gi|42562492|ref|NP_174613.2| RNA recognition motif (RRM)-containing protein
[Arabidopsis thaliana]
Length = 245
Score = 67 bits (162), Expect = 3e-010
Identities = 45/95 (47%), Positives = 56/95 (58%), Gaps = 9/95 (9%)
Frame = +1
Query: 112 PAHHHYAAIQQGIPAAAA-AAYNLYAT--AGYSPYSPDYTYPT-NYYGLYGGGATSQYPV 279
P H+ IP+ + Y L T G+S YS DY YPT +YY +Y GGAT+Q+P+
Sbjct: 109 PFKTHFGTAATAIPSPLPFSHYTLPYTNPFGFSSYSMDYNYPTQSYYNVY-GGATAQHPM 167
Query: 280 YGTGGMLTGGAA--AAAFYPYLQYGEAANGGAAAY 378
YG+G M TG AA AA FYPYLQ+ E NG Y
Sbjct: 168 YGSGPM-TGVAAAPAAGFYPYLQFAE-GNGPVTGY 200
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 340,404,849,014
Number of Sequences: 7387702
Number of Extensions: 340404849014
Number of Successful Extensions: 174486074
Number of sequences better than 0.0: 0
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