BLASTX 7.6.2
Query= RU15029 /QuerySize=255
(254 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|20139943|sp|Q9M6D9.1|STM_BRAOL RecName: Full=Homeobox protein... 133 5e-030
gi|86611375|gb|ABD14371.1| homeodomain protein Kn1 [Prunus dulcis] 131 1e-029
gi|11037020|gb|AAG27464.1|AF308454_1 knotted class I homeodomain... 121 2e-026
gi|3426304|gb|AAC32262.1| Knox class 1 protein [Pisum sativum] 120 3e-026
gi|27413549|gb|AAO11694.1| Knotted-1-like homeobox protein H1 [N... 117 3e-025
>gi|20139943|sp|Q9M6D9.1|STM_BRAOL RecName: Full=Homeobox protein SHOOT
MERISTEMLESS
Length = 383
Score = 133 bits (333), Expect = 5e-030
Identities = 61/84 (72%), Positives = 73/84 (86%)
Frame = +1
Query: 1 LGEDPALDQFMEAYCEMLIKYEQEVSKPFKEAMLFLKKIESQFKTLTVSSASDSGCGEGG 180
LGEDP LDQFMEAYCEML+KYEQE+SKPFKEAM+FL+ +E QFK+L++SS S G GE
Sbjct: 176 LGEDPGLDQFMEAYCEMLVKYEQELSKPFKEAMVFLQHVECQFKSLSLSSPSSLGYGEAA 235
Query: 181 MDRNNNGSSEEEVDVNNSLIDPQA 252
++RNNNGSSEEEVD+NN +DPQA
Sbjct: 236 IERNNNGSSEEEVDMNNEFVDPQA 259
>gi|86611375|gb|ABD14371.1| homeodomain protein Kn1 [Prunus dulcis]
Length = 384
Score = 131 bits (329), Expect = 1e-029
Identities = 66/84 (78%), Positives = 74/84 (88%), Gaps = 2/84 (2%)
Frame = +1
Query: 1 LGEDPALDQFMEAYCEMLIKYEQEVSKPFKEAMLFLKKIESQFKTLTVSSASDSGCGEGG 180
LGEDPALDQFMEAYCEML KYEQE+SKPFKEAM+FL++IESQFK LT+SS+SDS G
Sbjct: 180 LGEDPALDQFMEAYCEMLTKYEQELSKPFKEAMIFLQRIESQFKALTLSSSSDSAVCGDG 239
Query: 181 MDRNNNGSSEEEVDVNNSLIDPQA 252
+DR NGSSEEEVDVNN+ IDPQA
Sbjct: 240 LDR--NGSSEEEVDVNNNFIDPQA 261
>gi|11037020|gb|AAG27464.1|AF308454_1 knotted class I homeodomain KNOX [Medicago
truncatula]
Length = 381
Score = 121 bits (302), Expect = 2e-026
Identities = 64/86 (74%), Positives = 74/86 (86%), Gaps = 5/86 (5%)
Frame = +1
Query: 1 LGEDPALDQFMEAYCEMLIKYEQEVSKPFKEAMLFLKKIESQFKTLTVSSASDS-GCGEG 177
LGEDPALDQFMEAYCEMLIKYEQE+SKP KEAMLFL++IE QFK LTVSS+SD+ C EG
Sbjct: 177 LGEDPALDQFMEAYCEMLIKYEQELSKPLKEAMLFLQRIEVQFKNLTVSSSSDNIACSEG 236
Query: 178 GMDRNNNGSSEEE-VDVNNSLIDPQA 252
G + NGSSEE+ VD+ N++IDPQA
Sbjct: 237 G---DRNGSSEEDHVDLYNNMIDPQA 259
>gi|3426304|gb|AAC32262.1| Knox class 1 protein [Pisum sativum]
Length = 371
Score = 120 bits (300), Expect = 3e-026
Identities = 62/85 (72%), Positives = 74/85 (87%), Gaps = 3/85 (3%)
Frame = +1
Query: 1 LGEDPALDQFMEAYCEMLIKYEQEVSKPFKEAMLFLKKIESQFKTLTVSSASDS-GCGEG 177
+GEDPALDQFMEAYCEMLIKYEQE+SKP KEAMLFL++IE QFK LTVSS+SD+ C EG
Sbjct: 167 IGEDPALDQFMEAYCEMLIKYEQELSKPLKEAMLFLQRIEVQFKNLTVSSSSDNIACNEG 226
Query: 178 GMDRNNNGSSEEEVDVNNSLIDPQA 252
G DRN + S E++VD+ N++IDPQA
Sbjct: 227 G-DRNGS-SEEDQVDLYNNMIDPQA 249
>gi|27413549|gb|AAO11694.1| Knotted-1-like homeobox protein H1 [Nicotiana
tabacum]
Length = 343
Score = 117 bits (292), Expect = 3e-025
Identities = 61/85 (71%), Positives = 70/85 (82%), Gaps = 2/85 (2%)
Frame = +1
Query: 1 LGEDPALDQFMEAYCEMLIKYEQEVSKPFKEAMLFLKKIESQFKTLTVSSASDSGCGEG- 177
+GEDPALDQFMEAYCEML KYEQE+SKPFKEAM+FL +IE QFK LT++S+S+S G
Sbjct: 138 IGEDPALDQFMEAYCEMLTKYEQELSKPFKEAMVFLSRIECQFKALTLTSSSESVAALGE 197
Query: 178 GMDRNNNGSSEEEVDVNNSLIDPQA 252
+DRN NGSS EEVDVNN ID QA
Sbjct: 198 AIDRNGNGSS-EEVDVNNGFIDLQA 221
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 346,846,772,288
Number of Sequences: 7387702
Number of Extensions: 346846772288
Number of Successful Extensions: 183036277
Number of sequences better than 0.0: 0
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