BLASTX 7.6.2
Query= RU15072 /QuerySize=475
(474 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|147811263|emb|CAN65486.1| hypothetical protein [Vitis vinifera] 229 4e-059
gi|42566724|ref|NP_192998.2| ATRAP74/RAP74; transcription initia... 207 2e-052
gi|5823572|emb|CAB53754.1| putative protein [Arabidopsis thaliana] 207 2e-052
gi|39545900|gb|AAR28013.1| mutant TFIIF-alpha [Arabidopsis thali... 207 2e-052
gi|87241158|gb|ABD33016.1| Transcription Factor IIF, Rap30/Rap74... 198 1e-049
>gi|147811263|emb|CAN65486.1| hypothetical protein [Vitis vinifera]
Length = 435
Score = 229 bits (583), Expect = 4e-059
Identities = 109/153 (71%), Positives = 130/153 (84%), Gaps = 3/153 (1%)
Frame = +1
Query: 10 KEETARKNRLGLNKKAGDDEDDEGGNEEDDLDDDSSEKGDDWEHEEIFTDDDEAVGINPE 189
+EE RKNRLGLNK++GDD+++ + DLDDD EKGDDWEHEEIFTDDDEAVG +PE
Sbjct: 143 EEEAERKNRLGLNKRSGDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDEAVGNDPE 202
Query: 190 EREEFEPEVPAPPEIKQD-DDDDDNNEEEGGLSKSGKELKKLLGRSGGLNDSDAEDDDDD 366
ERE+ PEVPAPPEIKQD +D+DD+NEEEGGLSKSGKELKKLLG++ G+NDSDAEDDDDD
Sbjct: 203 EREDLAPEVPAPPEIKQDEEDEDDSNEEEGGLSKSGKELKKLLGKAAGMNDSDAEDDDDD 262
Query: 367 DDDMDDDIALPQALAPKQKDAPKQEPVDNSPIK 465
++ +D+I L LAPKQKD PK+EP DNSP+K
Sbjct: 263 EE--EDEIGLSPVLAPKQKDVPKEEPADNSPMK 293
>gi|42566724|ref|NP_192998.2| ATRAP74/RAP74; transcription initiation factor
[Arabidopsis thaliana]
Length = 543
Score = 207 bits (526), Expect = 2e-052
Identities = 100/155 (64%), Positives = 125/155 (80%), Gaps = 4/155 (2%)
Frame = +1
Query: 10 KEETARKNRLGLNKKAGDDEDDEGGNEED-DLDDDSSEKGDDWEHEEIFTDDDEAVGINP 186
+EE +RK+RLGLN+K+ DD+D+EG D D+DDD EKGDDWEHEEIFTDDDEAVG +P
Sbjct: 245 EEEASRKSRLGLNRKSNDDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVGNDP 304
Query: 187 EEREE-FEPEVPAPPEIKQDDDDDDNNEEEGGLSKSGKELKKLLGRSGGLNDSDAEDDDD 363
EERE+ PE+PAPPEIKQD+DD++N EEEGGLSKSGKELKKLLG++ GL++SD +DDDD
Sbjct: 305 EEREDLLAPEIPAPPEIKQDEDDEENEEEEGGLSKSGKELKKLLGKANGLDESDEDDDDD 364
Query: 364 DDDDMDDDIALPQALAPKQKDAPKQEPVDNSPIKP 468
DD+ + + KQK+A K+EPVDN+P KP
Sbjct: 365 SDDEEETNYG--TVTNSKQKEAAKEEPVDNAPAKP 397
>gi|5823572|emb|CAB53754.1| putative protein [Arabidopsis thaliana]
Length = 649
Score = 207 bits (526), Expect = 2e-052
Identities = 100/155 (64%), Positives = 125/155 (80%), Gaps = 4/155 (2%)
Frame = +1
Query: 10 KEETARKNRLGLNKKAGDDEDDEGGNEED-DLDDDSSEKGDDWEHEEIFTDDDEAVGINP 186
+EE +RK+RLGLN+K+ DD+D+EG D D+DDD EKGDDWEHEEIFTDDDEAVG +P
Sbjct: 245 EEEASRKSRLGLNRKSNDDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVGNDP 304
Query: 187 EEREE-FEPEVPAPPEIKQDDDDDDNNEEEGGLSKSGKELKKLLGRSGGLNDSDAEDDDD 363
EERE+ PE+PAPPEIKQD+DD++N EEEGGLSKSGKELKKLLG++ GL++SD +DDDD
Sbjct: 305 EEREDLLAPEIPAPPEIKQDEDDEENEEEEGGLSKSGKELKKLLGKANGLDESDEDDDDD 364
Query: 364 DDDDMDDDIALPQALAPKQKDAPKQEPVDNSPIKP 468
DD+ + + KQK+A K+EPVDN+P KP
Sbjct: 365 SDDEEETNYG--TVTNSKQKEAAKEEPVDNAPAKP 397
>gi|39545900|gb|AAR28013.1| mutant TFIIF-alpha [Arabidopsis thaliana]
Length = 640
Score = 207 bits (526), Expect = 2e-052
Identities = 100/155 (64%), Positives = 125/155 (80%), Gaps = 4/155 (2%)
Frame = +1
Query: 10 KEETARKNRLGLNKKAGDDEDDEGGNEED-DLDDDSSEKGDDWEHEEIFTDDDEAVGINP 186
+EE +RK+RLGLN+K+ DD+D+EG D D+DDD EKGDDWEHEEIFTDDDEAVG +P
Sbjct: 245 EEEASRKSRLGLNRKSNDDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVGNDP 304
Query: 187 EEREE-FEPEVPAPPEIKQDDDDDDNNEEEGGLSKSGKELKKLLGRSGGLNDSDAEDDDD 363
EERE+ PE+PAPPEIKQD+DD++N EEEGGLSKSGKELKKLLG++ GL++SD +DDDD
Sbjct: 305 EEREDLLAPEIPAPPEIKQDEDDEENEEEEGGLSKSGKELKKLLGKANGLDESDEDDDDD 364
Query: 364 DDDDMDDDIALPQALAPKQKDAPKQEPVDNSPIKP 468
DD+ + + KQK+A K+EPVDN+P KP
Sbjct: 365 SDDEEETNYG--TVTNSKQKEAAKEEPVDNAPAKP 397
>gi|87241158|gb|ABD33016.1| Transcription Factor IIF, Rap30/Rap74, interaction
[Medicago truncatula]
Length = 536
Score = 198 bits (501), Expect = 1e-049
Identities = 105/156 (67%), Positives = 122/156 (78%), Gaps = 8/156 (5%)
Frame = +1
Query: 13 EETARKNRLGLNKKAGDDEDDEGGNEED-DLDDDSSEKGDDWEHEEIFTDDDEAVGINPE 189
EE RK R NKK D+D+EG D D DD EKGDDWEHEEIFTDDDEAVG +PE
Sbjct: 244 EEVDRKKR--PNKKNTFDDDEEGPRGGDHDEDDYDVEKGDDWEHEEIFTDDDEAVGNDPE 301
Query: 190 EREEFEPEVPAPPEIKQDD---DDDDNNEEEGGLSKSGKELKKLLGRSGGLNDSDAEDDD 360
ERE+ PEVPAPPEIKQDD ++D++NEE GGLSKSGKELKKLLGR+GGL++SD +DDD
Sbjct: 302 EREDLAPEVPAPPEIKQDDEEEEEDEDNEEGGGLSKSGKELKKLLGRTGGLSESD-DDDD 360
Query: 361 DDDDDMDDDIALPQALAPKQKDAPKQEPVDNSPIKP 468
DDDDD+DD+ +P A KQK+ PK+EPVDNSP KP
Sbjct: 361 DDDDDIDDEDGVPAVTATKQKE-PKEEPVDNSPSKP 395
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 346,846,772,288
Number of Sequences: 7387702
Number of Extensions: 346846772288
Number of Successful Extensions: 183036277
Number of sequences better than 0.0: 0
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