BLASTX 7.6.2
Query= RU15468 /QuerySize=265
(264 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157349819|emb|CAO39675.1| unnamed protein product [Vitis vini... 82 1e-014
gi|15222553|ref|NP_176569.1| zinc finger (C3HC4-type RING finger... 74 3e-012
gi|15233117|ref|NP_191705.1| BRH1 (BRASSINOSTEROID-RESPONSIVE RI... 74 3e-012
gi|21554155|gb|AAM63234.1| RING zinc finger protein-like [Arabid... 68 2e-010
gi|15238072|ref|NP_198956.1| zinc finger (C3HC4-type RING finger... 68 2e-010
>gi|157349819|emb|CAO39675.1| unnamed protein product [Vitis vinifera]
Length = 167
Score = 82 bits (201), Expect = 1e-014
Identities = 39/59 (66%), Positives = 44/59 (74%)
Frame = -3
Query: 178 MGFPAGYTELLLPKLFLSTLSLLGFIRKLITTLFSLLGLQDFIETDNAWSDPAPTPPGY 2
MGFP GYTE+ LPKLFL TLS LGFIRKLI +LF LGL DF+ETD +WS+ P Y
Sbjct: 1 MGFPVGYTEVFLPKLFLHTLSFLGFIRKLIFSLFHFLGLSDFLETDVSWSETQAQVPEY 59
>gi|15222553|ref|NP_176569.1| zinc finger (C3HC4-type RING finger) family
protein [Arabidopsis thaliana]
Length = 166
Score = 74 bits (180), Expect = 3e-012
Identities = 34/58 (58%), Positives = 43/58 (74%), Gaps = 3/58 (5%)
Frame = -3
Query: 178 MGFPAGYTELLLPKLFLSTLSLLGFIRKLITTLFSLLGLQDFIETD---NAWSDPAPT 14
MGFP GY+ELLLPK+F LS LG IRKLI+T+F ++GL DF+E + +W DP PT
Sbjct: 1 MGFPVGYSELLLPKIFFYLLSFLGLIRKLISTMFKIIGLPDFLEPEPVSTSWPDPPPT 58
>gi|15233117|ref|NP_191705.1| BRH1 (BRASSINOSTEROID-RESPONSIVE RING-H2); protein
binding / zinc ion binding [Arabidopsis thaliana]
Length = 170
Score = 74 bits (180), Expect = 3e-012
Identities = 32/56 (57%), Positives = 40/56 (71%)
Frame = -3
Query: 178 MGFPAGYTELLLPKLFLSTLSLLGFIRKLITTLFSLLGLQDFIETDNAWSDPAPTP 11
MGFP GYTE+ LPKLF+ TLS+LGFIR ++ ++F LGL DF+E D W D P
Sbjct: 1 MGFPVGYTEVFLPKLFVQTLSILGFIRTIVFSIFRFLGLSDFLEMDQTWPDYTSYP 56
>gi|21554155|gb|AAM63234.1| RING zinc finger protein-like [Arabidopsis
thaliana]
Length = 176
Score = 68 bits (165), Expect = 2e-010
Identities = 34/59 (57%), Positives = 41/59 (69%)
Frame = -3
Query: 178 MGFPAGYTELLLPKLFLSTLSLLGFIRKLITTLFSLLGLQDFIETDNAWSDPAPTPPGY 2
MG+P GYTELLLP++FL LSLLG IR LI T F +LGL DF+E+D S + P Y
Sbjct: 1 MGYPVGYTELLLPRIFLHLLSLLGLIRTLIDTGFRILGLPDFLESDPVLSSSSWLEPPY 59
>gi|15238072|ref|NP_198956.1| zinc finger (C3HC4-type RING finger) family
protein [Arabidopsis thaliana]
Length = 176
Score = 68 bits (164), Expect = 2e-010
Identities = 34/59 (57%), Positives = 41/59 (69%)
Frame = -3
Query: 178 MGFPAGYTELLLPKLFLSTLSLLGFIRKLITTLFSLLGLQDFIETDNAWSDPAPTPPGY 2
MG+P GYTELLLP++FL LSLLG IR LI T F +LGL DF+E+D S + P Y
Sbjct: 1 MGYPVGYTELLLPRIFLHLLSLLGLIRTLIDTGFRILGLPDFLESDPVSSSSSWLEPPY 59
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 353,252,282,926
Number of Sequences: 7387702
Number of Extensions: 353252282926
Number of Successful Extensions: 191236155
Number of sequences better than 0.0: 0
|