BLASTX 7.6.2
Query= RU17037 /QuerySize=855
(854 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|7804960|gb|AAF70196.1|AF255711_1 putative histone deacetylase... 174 9e-042
gi|51854334|gb|AAU10714.1| putative histone deacetylase HD2 [Ory... 174 1e-041
gi|115465847|ref|NP_001056523.1| Os05g0597100 [Oryza sativa (jap... 174 1e-041
gi|125553576|gb|EAY99285.1| hypothetical protein OsI_020518 [Ory... 173 3e-041
gi|125595448|gb|EAZ35507.1| hypothetical protein OsJ_018990 [Ory... 173 3e-041
>gi|7804960|gb|AAF70196.1|AF255711_1 putative histone deacetylase HD2 [Oryza
sativa]
Length = 297
Score = 174 bits (440), Expect = 9e-042
Identities = 102/198 (51%), Positives = 120/198 (60%), Gaps = 8/198 (4%)
Frame = +2
Query: 2 DEFESESEEEEEELPMIAAENGKVENAKPAIAKSNAVKPESSGKQKVKIEEPIKVVADED 181
D E E EEEEE++ NGKVE K K S+ K K + + D+D
Sbjct: 105 DSEEVEDEEEEEKIIPAPRANGKVE-GKENEQKKQGKTDSSASKSKAAVNDD----DDDD 159
Query: 182 DSASDMDDSDDLLDEDDSSD-DDDDESEDDSDEEDEETPTPKKPESKKRAQVSGSVKTPV 358
DSA D +DL EDD D +DD SEDD DE DEE TPKKPE+ KR +KTP
Sbjct: 160 DSAEDDSQDEDLSPEDDDDDSSEDDSSEDDEDESDEE-DTPKKPETGKRKVAEIVLKTPS 218
Query: 359 SAKKAKIVTSTPQKTDGKKGGHTDTPHPAKK-GKTPATDKSKTQTPKSAGGNFSCGSCSK 535
S KKAKI T + QKT KKG H TPHPAK+ KTP DKSK ++PKS GG+ SC SCSK
Sbjct: 219 SDKKAKIATPSGQKTGDKKGVHVATPHPAKQASKTPVNDKSKEKSPKSGGGSISCKSCSK 278
Query: 536 SFGSDGALQSHNKAKHSA 589
+F S+ ALQSH+KAKH A
Sbjct: 279 TFNSEMALQSHSKAKHPA 296
>gi|51854334|gb|AAU10714.1| putative histone deacetylase HD2 [Oryza sativa
(japonica cultivar-group)]
Length = 297
Score = 174 bits (439), Expect = 1e-041
Identities = 104/200 (52%), Positives = 122/200 (61%), Gaps = 12/200 (6%)
Frame = +2
Query: 2 DEFESESEEEEEELPMIAAENGKVENAKPAIAKSNAVKPESSGKQKVKIEEPIKVVADED 181
D E E EEEEE++ NGKVE K K S+ K K + + D+D
Sbjct: 105 DSEEVEDEEEEEKIIPAPRANGKVE-GKENEQKKQGKTDSSASKSKAAVND------DDD 157
Query: 182 DSASDMDDS--DDLLDEDDSSD-DDDDESEDDSDEEDEETPTPKKPESKKRAQVSGSVKT 352
D SD DDS +DL EDD D +DD SEDD DE DEE TPKKPE+ KR +KT
Sbjct: 158 DDDSDEDDSEDEDLSPEDDDDDSSEDDSSEDDEDESDEE-DTPKKPETGKRKVAEIVLKT 216
Query: 353 PVSAKKAKIVTSTPQKTDGKKGGHTDTPHPAKK-GKTPATDKSKTQTPKSAGGNFSCGSC 529
P S KKAKI T + QKT KKG H TPHPAK+ KTP DKSK ++PKS GG+ SC SC
Sbjct: 217 PSSDKKAKIATPSGQKTGDKKGVHVATPHPAKQASKTPVNDKSKEKSPKSGGGSISCKSC 276
Query: 530 SKSFGSDGALQSHNKAKHSA 589
SK+F S+ ALQSH+KAKH A
Sbjct: 277 SKTFNSEMALQSHSKAKHPA 296
>gi|115465847|ref|NP_001056523.1| Os05g0597100 [Oryza sativa (japonica
cultivar-group)]
Length = 297
Score = 174 bits (439), Expect = 1e-041
Identities = 104/200 (52%), Positives = 122/200 (61%), Gaps = 12/200 (6%)
Frame = +2
Query: 2 DEFESESEEEEEELPMIAAENGKVENAKPAIAKSNAVKPESSGKQKVKIEEPIKVVADED 181
D E E EEEEE++ NGKVE K K S+ K K + + D+D
Sbjct: 105 DSEEVEDEEEEEKIIPAPRANGKVE-GKENEQKKQGKTDSSASKSKAAVND------DDD 157
Query: 182 DSASDMDDS--DDLLDEDDSSD-DDDDESEDDSDEEDEETPTPKKPESKKRAQVSGSVKT 352
D SD DDS +DL EDD D +DD SEDD DE DEE TPKKPE+ KR +KT
Sbjct: 158 DDDSDEDDSEDEDLSPEDDDDDSSEDDSSEDDEDESDEE-DTPKKPETGKRKVAEIVLKT 216
Query: 353 PVSAKKAKIVTSTPQKTDGKKGGHTDTPHPAKK-GKTPATDKSKTQTPKSAGGNFSCGSC 529
P S KKAKI T + QKT KKG H TPHPAK+ KTP DKSK ++PKS GG+ SC SC
Sbjct: 217 PSSDKKAKIATPSGQKTGDKKGVHVATPHPAKQASKTPVNDKSKEKSPKSGGGSISCKSC 276
Query: 530 SKSFGSDGALQSHNKAKHSA 589
SK+F S+ ALQSH+KAKH A
Sbjct: 277 SKTFNSEMALQSHSKAKHPA 296
>gi|125553576|gb|EAY99285.1| hypothetical protein OsI_020518 [Oryza sativa
(indica cultivar-group)]
Length = 196
Score = 173 bits (436), Expect = 3e-041
Identities = 103/197 (52%), Positives = 121/197 (61%), Gaps = 12/197 (6%)
Frame = +2
Query: 11 ESESEEEEEELPMIAAENGKVENAKPAIAKSNAVKPESSGKQKVKIEEPIKVVADEDDSA 190
E E EEEEE++ NGKVE K K S+ K K + + D+DD
Sbjct: 7 EVEDEEEEEKIIPAPRANGKVE-GKENEQKKQGKTDSSASKSKAAVND------DDDDDD 59
Query: 191 SDMDDS--DDLLDEDDSSD-DDDDESEDDSDEEDEETPTPKKPESKKRAQVSGSVKTPVS 361
SD DDS +DL EDD D +DD SEDD DE DEE TPKKPE+ KR +KTP S
Sbjct: 60 SDEDDSEDEDLSPEDDDDDSSEDDSSEDDEDESDEE-ETPKKPETGKRKVAEIVLKTPSS 118
Query: 362 AKKAKIVTSTPQKTDGKKGGHTDTPHPAKK-GKTPATDKSKTQTPKSAGGNFSCGSCSKS 538
KKAKI T + QKT KKG H TPHPAK+ KTP DKSK ++PKS GG+ SC SCSK+
Sbjct: 119 DKKAKIATPSGQKTGDKKGVHVATPHPAKQASKTPVNDKSKEKSPKSGGGSISCKSCSKT 178
Query: 539 FGSDGALQSHNKAKHSA 589
F S+ ALQSH+KAKH A
Sbjct: 179 FNSEMALQSHSKAKHPA 195
>gi|125595448|gb|EAZ35507.1| hypothetical protein OsJ_018990 [Oryza sativa
(japonica cultivar-group)]
Length = 196
Score = 173 bits (436), Expect = 3e-041
Identities = 103/197 (52%), Positives = 121/197 (61%), Gaps = 12/197 (6%)
Frame = +2
Query: 11 ESESEEEEEELPMIAAENGKVENAKPAIAKSNAVKPESSGKQKVKIEEPIKVVADEDDSA 190
E E EEEEE++ NGKVE K K S+ K K + + D+DD
Sbjct: 7 EVEDEEEEEKIIPAPRANGKVE-GKENEQKKQGKTDSSASKSKAAVND------DDDDDD 59
Query: 191 SDMDDS--DDLLDEDDSSD-DDDDESEDDSDEEDEETPTPKKPESKKRAQVSGSVKTPVS 361
SD DDS +DL EDD D +DD SEDD DE DEE TPKKPE+ KR +KTP S
Sbjct: 60 SDEDDSEDEDLSPEDDDDDSSEDDSSEDDEDESDEE-DTPKKPETGKRKVAEIVLKTPSS 118
Query: 362 AKKAKIVTSTPQKTDGKKGGHTDTPHPAKK-GKTPATDKSKTQTPKSAGGNFSCGSCSKS 538
KKAKI T + QKT KKG H TPHPAK+ KTP DKSK ++PKS GG+ SC SCSK+
Sbjct: 119 DKKAKIATPSGQKTGDKKGVHVATPHPAKQASKTPVNDKSKEKSPKSGGGSISCKSCSKT 178
Query: 539 FGSDGALQSHNKAKHSA 589
F S+ ALQSH+KAKH A
Sbjct: 179 FNSEMALQSHSKAKHPA 195
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 397,919,240,014
Number of Sequences: 7387702
Number of Extensions: 397919240014
Number of Successful Extensions: 209897449
Number of sequences better than 0.0: 0
|