BLASTX 7.6.2
Query= RU17075 /QuerySize=742
(741 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157350930|emb|CAO41045.1| unnamed protein product [Vitis vini... 296 1e-078
gi|15223748|ref|NP_172893.1| ATWHY1/PTAC1 (A. THALIANA WHIRLY 1)... 275 4e-072
gi|118485247|gb|ABK94483.1| unknown [Populus trichocarpa] 260 8e-068
gi|145328252|ref|NP_001077872.1| ATWHY3/PTAC11 (A. THALIANA WHIR... 260 1e-067
gi|9651810|gb|AAF91282.1|AF233342_1 DNA-binding protein p24 [Sol... 254 7e-066
>gi|157350930|emb|CAO41045.1| unnamed protein product [Vitis vinifera]
Length = 268
Score = 296 bits (757), Expect = 1e-078
Identities = 156/230 (67%), Positives = 182/230 (79%), Gaps = 14/230 (6%)
Frame = +3
Query: 42 LSSPVAVQN----PNHSLP---SKARVFSTNSFGFAPNSTSFGKRRLALKCRQSEYFEQQ 200
LSS +QN PNHSL S + + T+ ++T +++ +L+CRQS+YF+QQ
Sbjct: 7 LSSSFTIQNPRLCPNHSLSSLHSSSPLSFTSRTPLLLSTTRHFRKKRSLQCRQSDYFQQQ 66
Query: 201 RLTPPTPPSTAASAAQSPSGATAVPARFYVGHSIYKGKAALTVEPKAPEFTALDSGAFKM 380
+T PP+ + S A+ R +VGHSIYKGKAALTVEPKAPEFT LDSGAFK+
Sbjct: 67 NITRRQPPNDS-------SFGGALQPRVFVGHSIYKGKAALTVEPKAPEFTPLDSGAFKV 119
Query: 381 SREGFVLLQFAPAAGVRVYDWSRKQVFSLSVTEIGSIVSLGARESCEFFHDPFKGKSEEG 560
S+EGFVLLQFAPAAGVR YDW RKQVFSLSVTEIGS++SLGARESCEFFHDPFKG+SEEG
Sbjct: 120 SKEGFVLLQFAPAAGVRQYDWGRKQVFSLSVTEIGSLISLGARESCEFFHDPFKGRSEEG 179
Query: 561 KVRKVLKVEPLPDGSGRFFNLSVQNKLINLEENIYIPVTRAEFAVLNSAF 710
KVRKVLKVEPLPDGSG FFNLSVQNKL+N++ENIYIPVTRAEFAVL SAF
Sbjct: 180 KVRKVLKVEPLPDGSGHFFNLSVQNKLLNMDENIYIPVTRAEFAVLISAF 229
>gi|15223748|ref|NP_172893.1| ATWHY1/PTAC1 (A. THALIANA WHIRLY 1); DNA binding /
telomeric DNA binding [Arabidopsis thaliana]
Length = 263
Score = 275 bits (701), Expect = 4e-072
Identities = 141/223 (63%), Positives = 168/223 (75%), Gaps = 4/223 (1%)
Frame = +3
Query: 42 LSSPVAVQNPNHSLPSKARVFSTNSFGFAPNSTSFGKRRLALKCRQSEYFEQQRLTPPTP 221
LS+P+ N N S + V T F + + +K + + R T
Sbjct: 5 LSTPLMAVNSNPRFLSSSSVLVTGGFAVKRHGFALKPTTKTVKL----FSVKSRQTDYFE 60
Query: 222 PSTAASAAQSPSGATAVPARFYVGHSIYKGKAALTVEPKAPEFTALDSGAFKMSREGFVL 401
++ SPS A +PARFYVGHSIYKGKAALTV+P+APEF ALDSGAFK+S++GF+L
Sbjct: 61 KQRFGDSSSSPSPAEGLPARFYVGHSIYKGKAALTVDPRAPEFVALDSGAFKLSKDGFLL 120
Query: 402 LQFAPAAGVRVYDWSRKQVFSLSVTEIGSIVSLGARESCEFFHDPFKGKSEEGKVRKVLK 581
LQFAP+AGVR YDWS+KQVFSLSVTEIG++VSLG RESCEFFHDPFKGKS+EGKVRKVLK
Sbjct: 121 LQFAPSAGVRQYDWSKKQVFSLSVTEIGTLVSLGPRESCEFFHDPFKGKSDEGKVRKVLK 180
Query: 582 VEPLPDGSGRFFNLSVQNKLINLEENIYIPVTRAEFAVLNSAF 710
VEPLPDGSG FFNLSVQNKL+N++E+IYIP+TRAEFAVL SAF
Sbjct: 181 VEPLPDGSGHFFNLSVQNKLVNVDESIYIPITRAEFAVLISAF 223
>gi|118485247|gb|ABK94483.1| unknown [Populus trichocarpa]
Length = 265
Score = 260 bits (664), Expect = 8e-068
Identities = 141/226 (62%), Positives = 170/226 (75%), Gaps = 16/226 (7%)
Frame = +3
Query: 45 SSPVAVQNPNHSLPSKARVFSTNSFGFAPNSTSFGKRR-LALKCRQSEYFEQQRLTPPTP 221
SSP QNP LP + ST S ++S K++ L +KC +Y++QQ T T
Sbjct: 12 SSP---QNPKLWLPQYNSLCSTKSISLNSKTSSTEKKKTLGVKC---QYYDQQHKTFTT- 64
Query: 222 PSTAASAAQSPSGATAV---PARFYVGHSIYKGKAALTVEPKAPEFTALDSGAFKMSREG 392
S+ SPS A V P + +VGHSIYKGKAALTVEP++PEF+ LDSGA+K+ +EG
Sbjct: 65 -----SSRSSPSSAPPVGESPPKVFVGHSIYKGKAALTVEPRSPEFSPLDSGAYKLVKEG 119
Query: 393 FVLLQFAPAAGVRVYDWSRKQVFSLSVTEIGSIVSLGARESCEFFHDPFKGKSEEGKVRK 572
FVLLQFAPAA VR YDW+RKQVFSLSVTEIG +VSL A+ SCEFFHDP KGKS+EGKVRK
Sbjct: 120 FVLLQFAPAASVRQYDWTRKQVFSLSVTEIGHLVSLDAKGSCEFFHDPNKGKSDEGKVRK 179
Query: 573 VLKVEPLPDGSGRFFNLSVQNKLINLEENIYIPVTRAEFAVLNSAF 710
+LKVEPLPDGSG FFNLSVQNK++N++ENIYIPVT+AE+ VL SAF
Sbjct: 180 LLKVEPLPDGSGHFFNLSVQNKVLNIDENIYIPVTKAEYTVLTSAF 225
>gi|145328252|ref|NP_001077872.1| ATWHY3/PTAC11 (A. THALIANA WHIRLY 3)
[Arabidopsis thaliana]
Length = 267
Score = 260 bits (662), Expect = 1e-067
Identities = 124/156 (79%), Positives = 142/156 (91%)
Frame = +3
Query: 243 AQSPSGATAVPARFYVGHSIYKGKAALTVEPKAPEFTALDSGAFKMSREGFVLLQFAPAA 422
+ S A RFYVGHSIYKGKAALT+EP+APEF AL+SGAFK+++EGF+LLQFAPAA
Sbjct: 72 SSSSQNAEVSSPRFYVGHSIYKGKAALTIEPRAPEFVALESGAFKLTKEGFLLLQFAPAA 131
Query: 423 GVRVYDWSRKQVFSLSVTEIGSIVSLGARESCEFFHDPFKGKSEEGKVRKVLKVEPLPDG 602
GVR YDWSRKQVFSLSVTEIG++VSLG RESCEFFHDPFKGK +EGKVRKVLKVEPLPDG
Sbjct: 132 GVRQYDWSRKQVFSLSVTEIGNLVSLGPRESCEFFHDPFKGKGDEGKVRKVLKVEPLPDG 191
Query: 603 SGRFFNLSVQNKLINLEENIYIPVTRAEFAVLNSAF 710
SGRFFNLSVQNKL+N++E++YIP+T+AEFAVL SAF
Sbjct: 192 SGRFFNLSVQNKLLNVDESVYIPITKAEFAVLISAF 227
>gi|9651810|gb|AAF91282.1|AF233342_1 DNA-binding protein p24 [Solanum
tuberosum]
Length = 274
Score = 254 bits (647), Expect = 7e-066
Identities = 126/164 (76%), Positives = 143/164 (87%), Gaps = 2/164 (1%)
Frame = +3
Query: 219 PPSTAASAAQSPSGATAVPARFYVGHSIYKGKAALTVEPKAPEFTALDSGAFKMSREGFV 398
P Q P GA+ + +VG+SIYKGKAALTVEP++PEF+ LDSGAFK+SREG V
Sbjct: 73 PQQQQQQQQQQPQGAST--PKVFVGYSIYKGKAALTVEPRSPEFSPLDSGAFKLSREGMV 130
Query: 399 LLQFAPAAGVRVYDWSRKQVFSLSVTEIGSIVSLGARESCEFFHDPFKGKSEEGKVRKVL 578
+LQFAPAAGVR YDWSRKQVFSLSVTEIGSI+SLGA++SCEFFHDP KG+S+EG+VRKVL
Sbjct: 131 MLQFAPAAGVRQYDWSRKQVFSLSVTEIGSIISLGAKDSCEFFHDPNKGRSDEGRVRKVL 190
Query: 579 KVEPLPDGSGRFFNLSVQNKLINLEENIYIPVTRAEFAVLNSAF 710
KVEPLPDGSG FFNLSVQNKLINL+ENIYIPVT+AEFAVL SAF
Sbjct: 191 KVEPLPDGSGHFFNLSVQNKLINLDENIYIPVTKAEFAVLVSAF 234
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 397,919,240,014
Number of Sequences: 7387702
Number of Extensions: 397919240014
Number of Successful Extensions: 209897449
Number of sequences better than 0.0: 0
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