BLASTX 7.6.2
Query= RU17118 /QuerySize=308
(307 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|9857312|dbj|BAB11939.1| MADS-box protein [Rosa rugosa] 139 5e-032
gi|22775406|dbj|BAC11906.1| MADS-box protein [Malus x domestica] 123 4e-027
gi|12666535|emb|CAC28022.1| Pistillata MADS-box protein [Malus x... 123 4e-027
gi|12666533|emb|CAC28021.1| Pistillata MADS-box protein [Malus x... 123 4e-027
gi|8163964|gb|AAF73940.1|AF230711_1 MADS box containing protein ... 119 5e-026
>gi|9857312|dbj|BAB11939.1| MADS-box protein [Rosa rugosa]
Length = 203
Score = 139 bits (350), Expect = 5e-032
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = +2
Query: 23 YSQSGKRLWDAKHENLCNEVDRVKKDNDGMQIELRHLKGEDITSLNHVDLMALEEAIENG 202
+SQSGKRLWDAKHENLCNEVDRVKKDNDGMQIELRHLKGEDITSLNHVDLMALEEAIENG
Sbjct: 73 HSQSGKRLWDAKHENLCNEVDRVKKDNDGMQIELRHLKGEDITSLNHVDLMALEEAIENG 132
Query: 203 LASIRDRMA 229
LASIRDRM+
Sbjct: 133 LASIRDRMS 141
>gi|22775406|dbj|BAC11906.1| MADS-box protein [Malus x domestica]
Length = 190
Score = 123 bits (308), Expect = 4e-027
Identities = 57/69 (82%), Positives = 64/69 (92%)
Frame = +2
Query: 23 YSQSGKRLWDAKHENLCNEVDRVKKDNDGMQIELRHLKGEDITSLNHVDLMALEEAIENG 202
+ QSGK+LWDAKHENL NEVDRVKKDND MQ+ELRHLKGEDITSLNHV+LMALEEA+ENG
Sbjct: 47 HGQSGKKLWDAKHENLSNEVDRVKKDNDSMQVELRHLKGEDITSLNHVELMALEEALENG 106
Query: 203 LASIRDRMA 229
L SIRD+ +
Sbjct: 107 LTSIRDKQS 115
>gi|12666535|emb|CAC28022.1| Pistillata MADS-box protein [Malus x domestica]
Length = 215
Score = 123 bits (308), Expect = 4e-027
Identities = 57/69 (82%), Positives = 64/69 (92%)
Frame = +2
Query: 23 YSQSGKRLWDAKHENLCNEVDRVKKDNDGMQIELRHLKGEDITSLNHVDLMALEEAIENG 202
+ QSGK+LWDAKHENL NEVDRVKKDND MQ+ELRHLKGEDITSLNHV+LMALEEA+ENG
Sbjct: 72 HGQSGKKLWDAKHENLSNEVDRVKKDNDSMQVELRHLKGEDITSLNHVELMALEEALENG 131
Query: 203 LASIRDRMA 229
L SIRD+ +
Sbjct: 132 LTSIRDKQS 140
>gi|12666533|emb|CAC28021.1| Pistillata MADS-box protein [Malus x domestica]
Length = 215
Score = 123 bits (308), Expect = 4e-027
Identities = 57/69 (82%), Positives = 64/69 (92%)
Frame = +2
Query: 23 YSQSGKRLWDAKHENLCNEVDRVKKDNDGMQIELRHLKGEDITSLNHVDLMALEEAIENG 202
+ QSGK+LWDAKHENL NEVDRVKKDND MQ+ELRHLKGEDITSLNHV+LMALEEA+ENG
Sbjct: 72 HGQSGKKLWDAKHENLSNEVDRVKKDNDSMQVELRHLKGEDITSLNHVELMALEEALENG 131
Query: 203 LASIRDRMA 229
L SIRD+ +
Sbjct: 132 LTSIRDKQS 140
>gi|8163964|gb|AAF73940.1|AF230711_1 MADS box containing protein PI [Hydrangea
macrophylla]
Length = 187
Score = 119 bits (298), Expect = 5e-026
Identities = 55/67 (82%), Positives = 63/67 (94%)
Frame = +2
Query: 23 YSQSGKRLWDAKHENLCNEVDRVKKDNDGMQIELRHLKGEDITSLNHVDLMALEEAIENG 202
++QSGKRLWDAKHENL NE+DR+KK+ND MQIELRHLKGED+TSLNH +LMALE A+ENG
Sbjct: 47 HTQSGKRLWDAKHENLSNEIDRIKKENDNMQIELRHLKGEDVTSLNHKELMALELALENG 106
Query: 203 LASIRDR 223
LASIRDR
Sbjct: 107 LASIRDR 113
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 397,919,240,014
Number of Sequences: 7387702
Number of Extensions: 397919240014
Number of Successful Extensions: 209897449
Number of sequences better than 0.0: 0
|