BLASTX 7.6.2
Query= RU17238 /QuerySize=392
(391 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157337172|emb|CAO21518.1| unnamed protein product [Vitis vini... 259 5e-068
gi|115466664|ref|NP_001056931.1| Os06g0170500 [Oryza sativa (jap... 253 3e-066
gi|83283985|gb|ABC01900.1| RRM-containing RNA-binding protein-li... 253 3e-066
gi|195646758|gb|ACG42847.1| unknown [Zea mays] 252 8e-066
gi|82400164|gb|ABB72821.1| RRM-containing RNA-binding protein-li... 251 1e-065
>gi|157337172|emb|CAO21518.1| unnamed protein product [Vitis vinifera]
Length = 465
Score = 259 bits (660), Expect = 5e-068
Identities = 120/130 (92%), Positives = 128/130 (98%)
Frame = +2
Query: 2 DYGLPVQVRDTALAIGSDDAIPKSDVNREFFAEEHDRKARAGIDYESSYGKARPNDTILK 181
+YGLPVQVRDTAL+I S+DAIPKSDVNRE+FAEEHDR+ARAGIDYESS+GK RPNDTILK
Sbjct: 88 EYGLPVQVRDTALSINSNDAIPKSDVNREYFAEEHDRRARAGIDYESSFGKVRPNDTILK 147
Query: 182 LQRTTPYYKRNRAHVCSFYIRGECTRGAECPYRHEMPITGELSQQNIKDRYYGVNDPVAM 361
LQRTTPYYKRNRAHVCSFY+RGECTRGAECPYRHEMPITGELSQQNIKDRYYGVNDPVA+
Sbjct: 148 LQRTTPYYKRNRAHVCSFYVRGECTRGAECPYRHEMPITGELSQQNIKDRYYGVNDPVAL 207
Query: 362 KLLNKAGEMP 391
KLLNKAGEMP
Sbjct: 208 KLLNKAGEMP 217
>gi|115466664|ref|NP_001056931.1| Os06g0170500 [Oryza sativa (japonica
cultivar-group)]
Length = 482
Score = 253 bits (645), Expect = 3e-066
Identities = 118/130 (90%), Positives = 126/130 (96%)
Frame = +2
Query: 2 DYGLPVQVRDTALAIGSDDAIPKSDVNREFFAEEHDRKARAGIDYESSYGKARPNDTILK 181
+YGLPVQVRDTALAI S+DAIP+SDVNRE+FAEEHDRKARAGIDY+SS+GKARPNDTILK
Sbjct: 88 EYGLPVQVRDTALAINSNDAIPRSDVNREYFAEEHDRKARAGIDYDSSHGKARPNDTILK 147
Query: 182 LQRTTPYYKRNRAHVCSFYIRGECTRGAECPYRHEMPITGELSQQNIKDRYYGVNDPVAM 361
LQRT PYYKRNRAHVCSFY+RGECTRGAECPYRHEMP TGELSQQNIKDRYYGVNDPVA+
Sbjct: 148 LQRTAPYYKRNRAHVCSFYVRGECTRGAECPYRHEMPETGELSQQNIKDRYYGVNDPVAL 207
Query: 362 KLLNKAGEMP 391
KLL KAGEMP
Sbjct: 208 KLLGKAGEMP 217
>gi|83283985|gb|ABC01900.1| RRM-containing RNA-binding protein-like protein
[Solanum tuberosum]
Length = 487
Score = 253 bits (645), Expect = 3e-066
Identities = 119/130 (91%), Positives = 125/130 (96%)
Frame = +2
Query: 2 DYGLPVQVRDTALAIGSDDAIPKSDVNREFFAEEHDRKARAGIDYESSYGKARPNDTILK 181
+YGLPVQVRDTAL+I S+DAIPKSDVNRE+FAEEHDR+ARAGIDYESSYGK R NDTILK
Sbjct: 88 EYGLPVQVRDTALSINSNDAIPKSDVNREYFAEEHDRRARAGIDYESSYGKVRANDTILK 147
Query: 182 LQRTTPYYKRNRAHVCSFYIRGECTRGAECPYRHEMPITGELSQQNIKDRYYGVNDPVAM 361
LQRTTPYYKRNRAHVCSFYIRG+CTRG ECPYRHEMP TGELSQQNIKDRYYGVNDPVAM
Sbjct: 148 LQRTTPYYKRNRAHVCSFYIRGQCTRGLECPYRHEMPETGELSQQNIKDRYYGVNDPVAM 207
Query: 362 KLLNKAGEMP 391
KLLNKAGEMP
Sbjct: 208 KLLNKAGEMP 217
>gi|195646758|gb|ACG42847.1| unknown [Zea mays]
Length = 490
Score = 252 bits (641), Expect = 8e-066
Identities = 116/130 (89%), Positives = 127/130 (97%)
Frame = +2
Query: 2 DYGLPVQVRDTALAIGSDDAIPKSDVNREFFAEEHDRKARAGIDYESSYGKARPNDTILK 181
+YGLPVQVRDTAL+I S+DAIP+SDVNRE+FAEEHDR+ARAGIDY+SSYGKARPNDTILK
Sbjct: 88 EYGLPVQVRDTALSINSNDAIPRSDVNREYFAEEHDRRARAGIDYDSSYGKARPNDTILK 147
Query: 182 LQRTTPYYKRNRAHVCSFYIRGECTRGAECPYRHEMPITGELSQQNIKDRYYGVNDPVAM 361
LQRT PYYKRNRAHVCSF++RGECTRGAECPYRHEMP TGELSQQNIKDRYYGVNDPVA+
Sbjct: 148 LQRTAPYYKRNRAHVCSFFVRGECTRGAECPYRHEMPETGELSQQNIKDRYYGVNDPVAL 207
Query: 362 KLLNKAGEMP 391
KLL+KAGEMP
Sbjct: 208 KLLSKAGEMP 217
>gi|82400164|gb|ABB72821.1| RRM-containing RNA-binding protein-like protein
[Solanum tuberosum]
Length = 462
Score = 251 bits (640), Expect = 1e-065
Identities = 118/130 (90%), Positives = 124/130 (95%)
Frame = +2
Query: 2 DYGLPVQVRDTALAIGSDDAIPKSDVNREFFAEEHDRKARAGIDYESSYGKARPNDTILK 181
+YGLPVQ RDTAL+I S+DAIPKSDVNRE+FAEEHDR+ARAGIDYESSYGK R NDTILK
Sbjct: 88 EYGLPVQFRDTALSINSNDAIPKSDVNREYFAEEHDRRARAGIDYESSYGKVRANDTILK 147
Query: 182 LQRTTPYYKRNRAHVCSFYIRGECTRGAECPYRHEMPITGELSQQNIKDRYYGVNDPVAM 361
LQRTTPYYKRNRAHVCSFYIRG+CTRG ECPYRHEMP TGELSQQNIKDRYYGVNDPVAM
Sbjct: 148 LQRTTPYYKRNRAHVCSFYIRGQCTRGLECPYRHEMPETGELSQQNIKDRYYGVNDPVAM 207
Query: 362 KLLNKAGEMP 391
KLLNKAGEMP
Sbjct: 208 KLLNKAGEMP 217
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 397,919,240,014
Number of Sequences: 7387702
Number of Extensions: 397919240014
Number of Successful Extensions: 209897449
Number of sequences better than 0.0: 0
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