BLASTX 7.6.2
Query= RU17322 /QuerySize=892
(891 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|18415195|ref|NP_567566.1| transducin family protein / WD-40 r... 291 7e-077
gi|195657365|gb|ACG48150.1| unknown [Zea mays] 265 3e-069
gi|115441933|ref|NP_001045246.1| Os01g0924300 [Oryza sativa (jap... 260 2e-067
gi|18415193|ref|NP_567565.1| transducin family protein / WD-40 r... 214 1e-053
gi|2832618|emb|CAA16747.1| putative protein [Arabidopsis thaliana] 208 8e-052
>gi|18415195|ref|NP_567566.1| transducin family protein / WD-40 repeat family
protein [Arabidopsis thaliana]
Length = 494
Score = 291 bits (743), Expect = 7e-077
Identities = 144/245 (58%), Positives = 182/245 (74%), Gaps = 8/245 (3%)
Frame = -1
Query: 729 VSWGPKGVSKPVPAVAEPPTQEEIDELIKSGILDKSGDGGGSDEDDEGEMEVETTSEGGE 550
VSW PKG K VP VAEPP++EE+ ELI+SG ++ +G DE++E E + E S E
Sbjct: 5 VSWIPKGNLKAVPDVAEPPSKEELKELIESGAFARNVEGSNEDEEEEIEEDGEEIS---E 61
Query: 549 VSQALEVAKALGRA--SKVTKSGSNYDDITEGLYD.DMDNYDDEDNDGIDLFSGGYGDLY 376
V A VA+ALG++ SK S D++++GL + DMDNYD+ED D I+LFS G GDLY
Sbjct: 62 VDHAKAVAEALGKSSKSKAVSSSMEVDEVSQGLKELDMDNYDEED-DEIELFSSGMGDLY 120
Query: 375 YPSNDMDPYLKKDKDDDEDSEDSEDMTINPNDAVIVCARNEDDISQLEIWLYTETEDGEP 196
YPSN+MDPYL KD DD++D ED +D T+ P D+VI+CARNEDD+S LE++LY E+ G P
Sbjct: 121 YPSNEMDPYL-KDVDDEDDEEDIDDTTVKPTDSVIICARNEDDVSHLEVYLYEES-SGSP 178
Query: 195 DVYVHHDIIISAFPLCTAWLDCPLKGGDKGNFIAVGLMGEPTIEIWDLDIIDEVQPCVVL 16
++YVHH III FPLCTAWLDCPLKGG+KGNF+A+G PTIEIWDLD+ DEV PC+ L
Sbjct: 179 NMYVHHHIIIPEFPLCTAWLDCPLKGGEKGNFVAIGSKDTPTIEIWDLDVRDEVLPCIQL 238
Query: 15 GGIAE 1
GGI E
Sbjct: 239 GGIEE 243
>gi|195657365|gb|ACG48150.1| unknown [Zea mays]
Length = 496
Score = 265 bits (677), Expect = 3e-069
Identities = 131/258 (50%), Positives = 179/258 (69%), Gaps = 8/258 (3%)
Frame = -1
Query: 762 EEEEEEEMISAVSWGPKGVSKPVPAVAEPPTQEEIDELIKSGILDKSGDGGGSDEDDEGE 583
EE+ + MISA+SW P+G +K VP VA+PPTQEEI E +K+ L + ++DD
Sbjct: 2 EEDSIKGMISAISWVPRGAAKSVPVVADPPTQEEIAEAMKTFDLGRDSGSDADEDDDAAT 61
Query: 582 MEVETTSEGGEVSQALEVAKALGRASKVTKSGSNYDDITEGLYD.DMDNYDDEDNDGIDL 403
ME++ +E V + E A+A A + K S DD+ + L + +MD YDDED + +D+
Sbjct: 62 MELDGAAE--TVEEVDEAARAKAVAKALCKGSSKADDVADELRELNMDAYDDEDEE-VDI 118
Query: 402 FSGGYGDLYYPSNDMDPYLKK----DKDDDEDSEDSEDMTINPNDAVIVCARNEDDISQL 235
F G GDLYYPSN MDPYLKK D++DD+D E+ ED I P D VIVCA +EDDI L
Sbjct: 119 FGSGLGDLYYPSNAMDPYLKKNNEDDEEDDDDDEEIEDKMIMPTDFVIVCAHSEDDIFSL 178
Query: 234 EIWLYTETEDGEPDVYVHHDIIISAFPLCTAWLDCPLKGGDKGNFIAVGLMGEPTIEIWD 55
++ + ET DGE +++VHHD+ ++ FPLCTAW+D LKGG+KGNF+AVG M +P IEIWD
Sbjct: 179 QVNILEETNDGEQNIFVHHDVPLADFPLCTAWMDFNLKGGEKGNFVAVGTM-DPAIEIWD 237
Query: 54 LDIIDEVQPCVVLGGIAE 1
LD++DEVQP +VLGG+++
Sbjct: 238 LDMVDEVQPHMVLGGLSK 255
>gi|115441933|ref|NP_001045246.1| Os01g0924300 [Oryza sativa (japonica
cultivar-group)]
Length = 487
Score = 260 bits (662), Expect = 2e-067
Identities = 132/248 (53%), Positives = 179/248 (72%), Gaps = 12/248 (4%)
Frame = -1
Query: 738 ISAVSWGPKGVSKPVPAVAEPPTQEEIDELIKSGILDKSGDGGGSDED-----DEGEMEV 574
ISA+SW P+G +K VP AEPPTQEEIDE IK+ I + G +DED + G MEV
Sbjct: 2 ISAISWVPRGAAKLVPVEAEPPTQEEIDEAIKA-IAQHTEGGSDADEDADDGEENGNMEV 60
Query: 573 ETTSEGGEVSQALEVAKALGRASKVTKSGSNYDDITEGLYD.DMDNYDDEDNDGIDLFSG 394
+ ++ E + EVA+A A + K DD+ + L + +MDNYD+E+ +G+++FS
Sbjct: 61 DAAAD-EEEEEVDEVAQAKAAAKALAKGA--VDDVADELKELNMDNYDEEE-EGLEIFSS 116
Query: 393 GYGDLYYPSNDMDPYLKKDKDDDEDSEDSEDMTINPNDAVIVCARNEDDISQLEIWLYTE 214
G GDLYY SND+DPYL K+ D+D+D E+ EDMTI P D ++VCA NEDD++ L++ L E
Sbjct: 117 GQGDLYYASNDLDPYL-KNNDEDDDDEEIEDMTIKPTDLMVVCAYNEDDVNSLQVNLLEE 175
Query: 213 TEDGEPDVYVHHDIIISAFPLCTAWLDCPLKGGDKGNFIAVGLMGEPTIEIWDLDIIDEV 34
TEDG+ +++VHH++ ++ FPLCTAW+D LKGGDKGNF+AVG M +P IEIWDLDI+DEV
Sbjct: 176 TEDGDLNMFVHHEVPLADFPLCTAWMDFNLKGGDKGNFVAVGTM-DPAIEIWDLDIVDEV 234
Query: 33 QPCVVLGG 10
QP +VLGG
Sbjct: 235 QPHMVLGG 242
>gi|18415193|ref|NP_567565.1| transducin family protein / WD-40 repeat family
protein [Arabidopsis thaliana]
Length = 461
Score = 214 bits (543), Expect = 1e-053
Identities = 112/220 (50%), Positives = 147/220 (66%), Gaps = 7/220 (3%)
Frame = -1
Query: 657 DELIKSGILDKSGDGGGSDEDDEGEMEVETTSEGGEVSQALEVAKALGRASK---VTKSG 487
DEL ++ D +D E E E E GEV+ A VA+ G++SK V+ S
Sbjct: 4 DELPSKEEIEMHKDSCKYFSNDTEEEETEDEEENGEVAHAKAVAEEFGKSSKSKNVSSSM 63
Query: 486 SNYDDITEGLYD.DMDNYDDEDNDGIDLFSGGYGDLYYPSNDMDPYLKKDKDDDEDSEDS 307
D++ EGL + DMDNYD+ED DGI++FS G GDLYY SN+MDPYLK++ D D+DS+D
Sbjct: 64 ELDDEVAEGLKELDMDNYDEED-DGIEIFSSGRGDLYYKSNEMDPYLKRNDDHDDDSDD- 121
Query: 306 EDMTINPNDAVIVCARNED-DISQLEIWLYTETEDGEPDVYVHHDIIISAFPLCTAWLDC 130
D I P D VIVCA +D + ++L++++ +T G P++Y HH II A PLCTAWLDC
Sbjct: 122 -DPPILPTDLVIVCAMTDDKEANRLDVYVSEDTSHGSPNMYNHHYRIIPAIPLCTAWLDC 180
Query: 129 PLKGGDKGNFIAVGLMGEPTIEIWDLDIIDEVQPCVVLGG 10
PLKGG++GNF+AVG G PTIEIWDLD ++ PCV LGG
Sbjct: 181 PLKGGERGNFLAVGSDGTPTIEIWDLDAWFDMLPCVQLGG 220
>gi|2832618|emb|CAA16747.1| putative protein [Arabidopsis thaliana]
Length = 964
Score = 208 bits (527), Expect = 8e-052
Identities = 94/139 (67%), Positives = 113/139 (81%), Gaps = 2/139 (1%)
Frame = -1
Query: 417 DGIDLFSGGYGDLYYPSNDMDPYLKKDKDDDEDSEDSEDMTINPNDAVIVCARNEDDISQ 238
D I+LFS G GDLYYPSN+MDPYL KD DD++D ED +D T+ P D+VI+CARNEDD+S
Sbjct: 560 DKIELFSSGMGDLYYPSNEMDPYL-KDVDDEDDEEDIDDTTVKPTDSVIICARNEDDVSH 618
Query: 237 LEIWLYTETEDGEPDVYVHHDIIISAFPLCTAWLDCPLKGGDKGNFIAVGLMGEPTIEIW 58
LE++LY E+ G P++YVHH III FPLCTAWLDCPLKGG+KGNF+A+G PTIEIW
Sbjct: 619 LEVYLYEES-SGSPNMYVHHHIIIPEFPLCTAWLDCPLKGGEKGNFVAIGSKDTPTIEIW 677
Query: 57 DLDIIDEVQPCVVLGGIAE 1
DLD+ DEV PC+ LGGI E
Sbjct: 678 DLDVRDEVLPCIQLGGIEE 696
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 397,919,240,014
Number of Sequences: 7387702
Number of Extensions: 397919240014
Number of Successful Extensions: 209897449
Number of sequences better than 0.0: 0
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