Blast details for RU17715 (GenBank)


BLASTX 7.6.2

Query= RU17715 /QuerySize=275
        (274 letters)

Database: GenBank nr;
          7,387,702 sequences; 2,551,671,255 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|147773703|emb|CAN76460.1| hypothetical protein [Vitis vinifera]     127   4e-028
gi|157338807|emb|CAO42158.1| unnamed protein product [Vitis vini...    127   4e-028
gi|157343565|emb|CAO68071.1| unnamed protein product [Vitis vini...    113   5e-024
gi|18395643|ref|NP_564229.1| basic helix-loop-helix (bHLH) famil...    112   7e-024
gi|11761480|gb|AAG28811.2|AC079374_14 helix-loop-helix protein h...    112   7e-024

>gi|147773703|emb|CAN76460.1| hypothetical protein [Vitis vinifera]

          Length = 237

 Score =  127 bits (317), Expect = 4e-028
 Identities = 62/73 (84%), Positives = 70/73 (95%), Gaps = 1/73 (1%)
 Frame = +3

Query:  54 KPLGGRKRKRNNTDKDMDKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQNLVP 233
           K LGGRKRKR+N +++ +KP+EVIHVRAKRGQATDSHSLAERVRREKINE+LRCLQ+LVP
Sbjct:  95 KNLGGRKRKRSN-ERENNKPREVIHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVP 153

Query: 234 GCYKTMGMAVMLD 272
           GCYKTMGMAVMLD
Sbjct: 154 GCYKTMGMAVMLD 166

>gi|157338807|emb|CAO42158.1| unnamed protein product [Vitis vinifera]

          Length = 258

 Score =  127 bits (317), Expect = 4e-028
 Identities = 62/73 (84%), Positives = 70/73 (95%), Gaps = 1/73 (1%)
 Frame = +3

Query:  54 KPLGGRKRKRNNTDKDMDKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQNLVP 233
           K LGGRKRKR+N +++ +KP+EVIHVRAKRGQATDSHSLAERVRREKINE+LRCLQ+LVP
Sbjct: 116 KNLGGRKRKRSN-ERENNKPREVIHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVP 174

Query: 234 GCYKTMGMAVMLD 272
           GCYKTMGMAVMLD
Sbjct: 175 GCYKTMGMAVMLD 187

>gi|157343565|emb|CAO68071.1| unnamed protein product [Vitis vinifera]

          Length = 254

 Score =  113 bits (281), Expect = 5e-024
 Identities = 53/70 (75%), Positives = 62/70 (88%)
 Frame = +3

Query:  63 GGRKRKRNNTDKDMDKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQNLVPGCY 242
           G  KR   + +K+ +KP+EV+HVRA+RGQATDSHSLAERVRR KINERLRCLQ++VPGCY
Sbjct: 128 GRGKRAMKSIEKEDEKPREVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCY 187

Query: 243 KTMGMAVMLD 272
           KTMGMAVMLD
Sbjct: 188 KTMGMAVMLD 197

>gi|18395643|ref|NP_564229.1| basic helix-loop-helix (bHLH) family protein
        [Arabidopsis thaliana]

          Length = 223

 Score =  112 bits (280), Expect = 7e-024
 Identities = 55/73 (75%), Positives = 64/73 (87%), Gaps = 5/73 (6%)
 Frame = +3

Query:  69 RKRKRNNTDKDMD-----KPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQNLVP 233
           R+RKR+  ++ M+     KPK+V+HVRAKRGQATDSHSLAERVRREKINERL+CLQ+LVP
Sbjct:  79 RRRKRSEEEEAMNGDETQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVP 138

Query: 234 GCYKTMGMAVMLD 272
           GCYK MGMAVMLD
Sbjct: 139 GCYKAMGMAVMLD 151

>gi|11761480|gb|AAG28811.2|AC079374_14 helix-loop-helix protein homolog,
        putative [Arabidopsis thaliana]

          Length = 166

 Score =  112 bits (280), Expect = 7e-024
 Identities = 55/73 (75%), Positives = 64/73 (87%), Gaps = 5/73 (6%)
 Frame = +3

Query:  69 RKRKRNNTDKDMD-----KPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQNLVP 233
           R+RKR+  ++ M+     KPK+V+HVRAKRGQATDSHSLAERVRREKINERL+CLQ+LVP
Sbjct:  22 RRRKRSEEEEAMNGDETQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVP 81

Query: 234 GCYKTMGMAVMLD 272
           GCYK MGMAVMLD
Sbjct:  82 GCYKAMGMAVMLD 94

  Database: GenBank nr
    Posted date:  Wed Dec 03 02:04:20 2008
  Number of letters in database: 2,551,671,255
  Number of sequences in database:  7,387,702

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 397,919,240,014
Number of Sequences: 7387702
Number of Extensions: 397919240014
Number of Successful Extensions: 209897449
Number of sequences better than 0.0: 0