BLASTX 7.6.2
Query= RU17773 /QuerySize=474
(473 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|78191426|gb|ABB29934.1| acidic ribosomal protein P1a-like [So... 155 7e-037
gi|15238170|ref|NP_199581.1| 60S acidic ribosomal protein P1 (RP... 146 4e-034
gi|21592477|gb|AAM64427.1| acidic ribosomal protein, putative [A... 146 6e-034
gi|118482660|gb|ABK93249.1| unknown [Populus trichocarpa] 132 6e-030
gi|210124564|gb|EEA72260.1| hypothetical protein BRAFLDRAFT_2064... 122 5e-027
>gi|78191426|gb|ABB29934.1| acidic ribosomal protein P1a-like [Solanum
tuberosum]
Length = 112
Score = 155 bits (391), Expect = 7e-037
Identities = 80/113 (70%), Positives = 92/113 (81%), Gaps = 6/113 (5%)
Frame = -3
Query: 420 MSTGEVACAYAAMILHDEGIPITAEKIATLIKSANVNVEAYWPNLFANLAEQKDLGGLTM 241
MS GEVAC YAA++LHDE IPITAEKI+TL+K+ANV VE YWP LFA LAE+++LG L M
Sbjct: 1 MSYGEVACTYAALLLHDEDIPITAEKISTLVKAANVTVEPYWPLLFAKLAEKRNLGDLIM 60
Query: 240 NVGCGGGGAAPVAMAAP-----AAATAAAPAAEEKKDEPEEESDDDLGISLFD 97
NVG GGGG A VA+AAP A AAAPAAEEKK+EP+EESDDD+G SLFD
Sbjct: 61 NVGAGGGGGA-VAVAAPTGGAAGGAAAAAPAAEEKKEEPKEESDDDMGFSLFD 112
>gi|15238170|ref|NP_199581.1| 60S acidic ribosomal protein P1 (RPP1C)
[Arabidopsis thaliana]
Length = 113
Score = 146 bits (367), Expect = 4e-034
Identities = 78/113 (69%), Positives = 90/113 (79%), Gaps = 5/113 (4%)
Frame = -3
Query: 420 MST-GEVACAYAAMILHDEGIPITAEKIATLIKSANVNVEAYWPNLFANLAEQKDLGGLT 244
MST GE+AC+YA MIL DEGI ITA+KIATL+K+A V +E+YWP LFA +AE++++ L
Sbjct: 1 MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLI 60
Query: 243 MNVGCGGGGAAPVAMAAPAA---ATAAAPAAEE-KKDEPEEESDDDLGISLFD 97
MNVG GGGG APVA AAPAA A AAAPAAEE KKDEP EESD DLG LFD
Sbjct: 61 MNVGAGGGGGAPVAAAAPAAGGGAAAAAPAAEEKKKDEPAEESDGDLGFGLFD 113
>gi|21592477|gb|AAM64427.1| acidic ribosomal protein, putative [Arabidopsis
thaliana]
Length = 112
Score = 146 bits (366), Expect = 6e-034
Identities = 77/112 (68%), Positives = 91/112 (81%), Gaps = 4/112 (3%)
Frame = -3
Query: 420 MST-GEVACAYAAMILHDEGIPITAEKIATLIKSANVNVEAYWPNLFANLAEQKDLGGLT 244
MST GE+AC+YA MIL DEGI ITA+KIATL+K+A V++E+YWP LFA +AE++++ L
Sbjct: 1 MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLI 60
Query: 243 MNVGCGGGGAAPVAMAAPAA--ATAAAPAAEE-KKDEPEEESDDDLGISLFD 97
MNVG GGGG+APVA AAPAA AAAPAAEE KKDEP EESD DLG LFD
Sbjct: 61 MNVGAGGGGSAPVAAAAPAAGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD 112
>gi|118482660|gb|ABK93249.1| unknown [Populus trichocarpa]
Length = 109
Score = 132 bits (331), Expect = 6e-030
Identities = 68/109 (62%), Positives = 82/109 (75%), Gaps = 1/109 (0%)
Frame = -3
Query: 420 MSTGEVACAYAAMILHDEGIPITAEKIATLIKSANVNVEAYWPNLFANLAEQKDLGGLTM 241
MS E+AC YAA+IL DE I ITAEKIATL+K+ANV +E+YWP LFA LAE++++ L M
Sbjct: 1 MSGSELACTYAALILFDENISITAEKIATLVKAANVQIESYWPGLFAKLAEKRNIEDLIM 60
Query: 240 NVGCGGGGAAPVAMAAPAAATAAAPAAEEKKDEPEEES-DDDLGISLFD 97
NVG GGG A VA A A A APAAEEKK+ +EES D+D+G SLFD
Sbjct: 61 NVGSGGGAAVAVAAPAGGAPAADAPAAEEKKEPVKEESEDEDMGFSLFD 109
>gi|210124564|gb|EEA72260.1| hypothetical protein BRAFLDRAFT_206448
[Branchiostoma floridae]
Length = 109
Score = 122 bits (306), Expect = 5e-027
Identities = 67/110 (60%), Positives = 77/110 (70%), Gaps = 6/110 (5%)
Frame = -3
Query: 417 STGEVACAYAAMILHDEGIPITAEKIATLIKSANVNVEAYWPNLFANLAEQKDLGGLTMN 238
ST E+AC Y+A+ILHD+ + IT EKI TLIK+ANV+VE +WP LFA E D+G L
Sbjct: 3 STSELACVYSALILHDDDVAITGEKIETLIKAANVDVEPFWPGLFAKALEGSDIGALLSA 62
Query: 237 VGCGGGGAAPVAMAAPAAATAA-APAAEEKKDE--PEEESDDDLGISLFD 97
VG GGGG AAPAA AA APAAEEKK E EEESDDD+G LFD
Sbjct: 63 VGSGGGGG---GAAAPAAGGAADAPAAEEKKKEESEEEESDDDMGFGLFD 109
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 397,919,240,014
Number of Sequences: 7387702
Number of Extensions: 397919240014
Number of Successful Extensions: 209897449
Number of sequences better than 0.0: 0
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