BLASTX 7.6.2
Query= RU18001 /QuerySize=483
(482 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157339738|emb|CAO44279.1| unnamed protein product [Vitis vini... 275 8e-073
gi|25412286|pir||B84645 hypothetical protein At2g25170 [imported... 261 9e-069
gi|18400745|ref|NP_565587.1| PKL (PICKLE) [Arabidopsis thaliana] 261 9e-069
gi|147858110|emb|CAN81395.1| hypothetical protein [Vitis vinifera] 238 8e-062
gi|55771379|dbj|BAD72546.1| chromatin-remodeling factor CHD3 [Or... 222 5e-057
>gi|157339738|emb|CAO44279.1| unnamed protein product [Vitis vinifera]
Length = 692
Score = 275 bits (701), Expect = 8e-073
Identities = 135/151 (89%), Positives = 141/151 (93%)
Frame = +1
Query: 1 LRFSWSKQTHVILADEMGLGKTIQSIAFLASLFEERVYPHLVVAPLSTLRNWEREFATWA 180
LRFSW KQTHVILADEMGLGKTIQSIAFLASLFEE V PHLVVAPLSTLRNWEREFATWA
Sbjct: 285 LRFSWGKQTHVILADEMGLGKTIQSIAFLASLFEENVSPHLVVAPLSTLRNWEREFATWA 344
Query: 181 PQMNVVMYVGSSQARAVIREYEFYFPKNHKKIKKKKSGQISGESKQDRIKFDVLLTSYEM 360
PQMNVVMYVGSS AR+VIR+YEFYFPK+HKKIKKKKSGQI ESKQDRIKFDVLLTSYEM
Sbjct: 345 PQMNVVMYVGSSHARSVIRDYEFYFPKSHKKIKKKKSGQIVTESKQDRIKFDVLLTSYEM 404
Query: 361 INLDSTSLKPIKWECMIVDEGHRLQKQGFKI 453
INLDS SLKPIKWECMIVDEGHRL+ + K+
Sbjct: 405 INLDSASLKPIKWECMIVDEGHRLKNKDSKL 435
>gi|25412286|pir||B84645 hypothetical protein At2g25170 [imported] - Arabidopsis
thaliana
Length = 1359
Score = 261 bits (666), Expect = 9e-069
Identities = 129/156 (82%), Positives = 139/156 (89%)
Frame = +1
Query: 1 LRFSWSKQTHVILADEMGLGKTIQSIAFLASLFEERVYPHLVVAPLSTLRNWEREFATWA 180
LRFSWSKQTHVILADEMGLGKTIQSIA LASLFEE + PHLV+APLSTLRNWEREFATWA
Sbjct: 284 LRFSWSKQTHVILADEMGLGKTIQSIALLASLFEENLIPHLVIAPLSTLRNWEREFATWA 343
Query: 181 PQMNVVMYVGSSQARAVIREYEFYFPKNHKKIKKKKSGQISGESKQDRIKFDVLLTSYEM 360
PQMNVVMY G++QARAVIRE+EFY K+ KKIKKKKSGQIS ESKQ RIKFDVLLTSYEM
Sbjct: 344 PQMNVVMYFGTAQARAVIREHEFYLSKDQKKIKKKKSGQISSESKQKRIKFDVLLTSYEM 403
Query: 361 INLDSTSLKPIKWECMIVDEGHRLQKQGFKIVFIIT 468
INLDS LKPIKWECMIVDEGHRL+ + K+ +T
Sbjct: 404 INLDSAVLKPIKWECMIVDEGHRLKNKDSKLFSSLT 439
>gi|18400745|ref|NP_565587.1| PKL (PICKLE) [Arabidopsis thaliana]
Length = 1384
Score = 261 bits (666), Expect = 9e-069
Identities = 129/156 (82%), Positives = 139/156 (89%)
Frame = +1
Query: 1 LRFSWSKQTHVILADEMGLGKTIQSIAFLASLFEERVYPHLVVAPLSTLRNWEREFATWA 180
LRFSWSKQTHVILADEMGLGKTIQSIA LASLFEE + PHLV+APLSTLRNWEREFATWA
Sbjct: 284 LRFSWSKQTHVILADEMGLGKTIQSIALLASLFEENLIPHLVIAPLSTLRNWEREFATWA 343
Query: 181 PQMNVVMYVGSSQARAVIREYEFYFPKNHKKIKKKKSGQISGESKQDRIKFDVLLTSYEM 360
PQMNVVMY G++QARAVIRE+EFY K+ KKIKKKKSGQIS ESKQ RIKFDVLLTSYEM
Sbjct: 344 PQMNVVMYFGTAQARAVIREHEFYLSKDQKKIKKKKSGQISSESKQKRIKFDVLLTSYEM 403
Query: 361 INLDSTSLKPIKWECMIVDEGHRLQKQGFKIVFIIT 468
INLDS LKPIKWECMIVDEGHRL+ + K+ +T
Sbjct: 404 INLDSAVLKPIKWECMIVDEGHRLKNKDSKLFSSLT 439
>gi|147858110|emb|CAN81395.1| hypothetical protein [Vitis vinifera]
Length = 585
Score = 238 bits (606), Expect = 8e-062
Identities = 117/132 (88%), Positives = 123/132 (93%)
Frame = +1
Query: 58 GKTIQSIAFLASLFEERVYPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGSSQARAVIR 237
GKTIQSIAFLASLFEE V PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGSS AR+VIR
Sbjct: 293 GKTIQSIAFLASLFEENVSPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGSSHARSVIR 352
Query: 238 EYEFYFPKNHKKIKKKKSGQISGESKQDRIKFDVLLTSYEMINLDSTSLKPIKWECMIVD 417
+YEFYFPK+HKKIKKKKSGQI ESKQDRIKFDVLLTSYEMINLDS SLKPIKWECMIVD
Sbjct: 353 DYEFYFPKSHKKIKKKKSGQIVTESKQDRIKFDVLLTSYEMINLDSASLKPIKWECMIVD 412
Query: 418 EGHRLQKQGFKI 453
EGHRL+ + K+
Sbjct: 413 EGHRLKNKDSKL 424
>gi|55771379|dbj|BAD72546.1| chromatin-remodeling factor CHD3 [Oryza sativa
Japonica Group]
Length = 1354
Score = 222 bits (565), Expect = 5e-057
Identities = 109/152 (71%), Positives = 126/152 (82%), Gaps = 1/152 (0%)
Frame = +1
Query: 1 LRFSWSKQTHVILADEMGLGKTIQSIAFLASLFEERVYPHLVVAPLSTLRNWEREFATWA 180
LR+SW VIL DEMGLGKTIQSIAFL SLF +++ PHLVVAPLSTLRNWEREFATWA
Sbjct: 291 LRYSWYHNKRVILGDEMGLGKTIQSIAFLGSLFVDKLGPHLVVAPLSTLRNWEREFATWA 350
Query: 181 PQMNVVMYVGSSQARAVIREYEFYFPKNH-KKIKKKKSGQISGESKQDRIKFDVLLTSYE 357
PQMNVVMY GS+ +R +IR+YEFY+PK KK+KKKKS + + KQ RIKFDVLLTSYE
Sbjct: 351 PQMNVVMYFGSAASREIIRKYEFYYPKEKPKKLKKKKSSPSNEDKKQSRIKFDVLLTSYE 410
Query: 358 MINLDSTSLKPIKWECMIVDEGHRLQKQGFKI 453
MIN+DST LK I+WECMIVDEGHRL+ + K+
Sbjct: 411 MINMDSTVLKTIEWECMIVDEGHRLKNKDSKL 442
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 397,919,240,014
Number of Sequences: 7387702
Number of Extensions: 397919240014
Number of Successful Extensions: 209897449
Number of sequences better than 0.0: 0
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