BLASTX 7.6.2
Query= RU18562 /QuerySize=385
(384 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|7635492|emb|CAB88665.1| tubby-like protein [Cicer arietinum] 137 3e-031
gi|190899426|gb|ACE98226.1| tubby-like protein [Populus tremula] 112 6e-024
gi|157335313|emb|CAO61143.1| unnamed protein product [Vitis vini... 111 2e-023
gi|190899420|gb|ACE98223.1| tubby-like protein [Populus tremula] 111 2e-023
gi|190899456|gb|ACE98241.1| tubby-like protein [Populus tremula] 111 2e-023
>gi|7635492|emb|CAB88665.1| tubby-like protein [Cicer arietinum]
Length = 411
Score = 137 bits (343), Expect = 3e-031
Identities = 65/103 (63%), Positives = 77/103 (74%), Gaps = 1/103 (0%)
Frame = +3
Query: 69 WAPSLPSMNSQPTCDAVDQPNSRSSRRFNSKQVSPRVPACNYNVGTVSYELNILRTRGPR 248
W +SQP D + QPN R +FNSKQVSPR PAC+Y V ++SYELN L TRGPR
Sbjct: 193 WGTKFTIYDSQPPHDIIVQPNCRGG-KFNSKQVSPRAPACSYLVSSISYELNTLWTRGPR 251
Query: 249 RMQCAMHSIPVSSIQEGGTAPTPTLFPQVYDEQFSPSPSLKDK 377
RM C M+SIPVS+I+EGG APTPTL PQ++DE FSPSP+LK K
Sbjct: 252 RMHCVMNSIPVSAIEEGGNAPTPTLLPQIFDEPFSPSPALKGK 294
>gi|190899426|gb|ACE98226.1| tubby-like protein [Populus tremula]
Length = 190
Score = 112 bits (280), Expect = 6e-024
Identities = 51/82 (62%), Positives = 65/82 (79%)
Frame = +3
Query: 135 RSSRRFNSKQVSPRVPACNYNVGTVSYELNILRTRGPRRMQCAMHSIPVSSIQEGGTAPT 314
R SRRF+S+QVSPR+PACNY++GT++YELN+LR+RGPRRM C MHSIP+SSI+EGGT PT
Sbjct: 1 RISRRFHSRQVSPRLPACNYSIGTITYELNVLRSRGPRRMHCMMHSIPMSSIEEGGTVPT 60
Query: 315 PTLFPQVYDEQFSPSPSLKDKE 380
T + + QF + K KE
Sbjct: 61 LTSLTETFGGQFPHLSTSKGKE 82
>gi|157335313|emb|CAO61143.1| unnamed protein product [Vitis vinifera]
Length = 416
Score = 111 bits (276), Expect = 2e-023
Identities = 55/95 (57%), Positives = 66/95 (69%)
Frame = +3
Query: 93 NSQPTCDAVDQPNSRSSRRFNSKQVSPRVPACNYNVGTVSYELNILRTRGPRRMQCAMHS 272
+SQP D Q N +S+ R +SKQ S R P+ NYNV T+SYELN+LRTRGPRRM C MH
Sbjct: 205 DSQPPHDPAVQSNCQSNGRLHSKQGSTRSPSGNYNVATISYELNVLRTRGPRRMHCTMHW 264
Query: 273 IPVSSIQEGGTAPTPTLFPQVYDEQFSPSPSLKDK 377
IP+S+IQEGGTAPTP F + +QF S K K
Sbjct: 265 IPISAIQEGGTAPTPMTFAKCQKDQFPQSADPKGK 299
>gi|190899420|gb|ACE98223.1| tubby-like protein [Populus tremula]
Length = 190
Score = 111 bits (276), Expect = 2e-023
Identities = 50/82 (60%), Positives = 65/82 (79%)
Frame = +3
Query: 135 RSSRRFNSKQVSPRVPACNYNVGTVSYELNILRTRGPRRMQCAMHSIPVSSIQEGGTAPT 314
R SRRF+S+QVSPR+PACNY++GT++YELN+LR+RGPRRM C MHSIP+SSI+EGGT PT
Sbjct: 1 RISRRFHSRQVSPRLPACNYSIGTITYELNVLRSRGPRRMHCMMHSIPMSSIEEGGTVPT 60
Query: 315 PTLFPQVYDEQFSPSPSLKDKE 380
T + + +F + K KE
Sbjct: 61 LTSLTETFGGRFPHLSTSKGKE 82
>gi|190899456|gb|ACE98241.1| tubby-like protein [Populus tremula]
Length = 190
Score = 111 bits (276), Expect = 2e-023
Identities = 50/82 (60%), Positives = 65/82 (79%)
Frame = +3
Query: 135 RSSRRFNSKQVSPRVPACNYNVGTVSYELNILRTRGPRRMQCAMHSIPVSSIQEGGTAPT 314
R SRRF+S+QVSPR+PACNY++GT++YELN+LR+RGPRRM C MHSIP+SSI+EGGT PT
Sbjct: 1 RISRRFHSRQVSPRLPACNYSIGTITYELNVLRSRGPRRMHCMMHSIPMSSIEEGGTVPT 60
Query: 315 PTLFPQVYDEQFSPSPSLKDKE 380
T + + +F + K KE
Sbjct: 61 LTSLTETFGGRFPHLSTSKGKE 82
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 397,919,240,014
Number of Sequences: 7387702
Number of Extensions: 397919240014
Number of Successful Extensions: 209897449
Number of sequences better than 0.0: 0
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