BLASTX 7.6.2
Query= RU19313 /QuerySize=501
(500 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157349196|emb|CAO24342.1| unnamed protein product [Vitis vini... 178 1e-043
gi|87240866|gb|ABD32724.1| Helicase, C-terminal; Argonaute and D... 171 2e-041
gi|15223286|ref|NP_171612.1| DCL1 (DICER-LIKE1); ATP-dependent h... 164 2e-039
gi|6715634|gb|AAF26461.1|AC007323_2 T25K16.4 [Arabidopsis thaliana] 164 2e-039
gi|6102610|gb|AAF03534.1|AF187317_1 CAF protein [Arabidopsis tha... 164 2e-039
>gi|157349196|emb|CAO24342.1| unnamed protein product [Vitis vinifera]
Length = 1961
Score = 178 bits (451), Expect = 1e-043
Identities = 80/92 (86%), Positives = 88/92 (95%)
Frame = -1
Query: 488 EEDNGKKKKNGSQTFTRQTLNDICLRKNWPIPFYRCVNEGGPAHAKKFTFAVRVNTTDRG 309
+++NGKKKKNGSQTFTRQTLNDICLR+NWP+P YRCVNEGGPAHAK+FTFAVRVNT D+G
Sbjct: 1869 DDENGKKKKNGSQTFTRQTLNDICLRRNWPMPVYRCVNEGGPAHAKRFTFAVRVNTNDKG 1928
Query: 308 WIDECVGEPMPSVKKAKDSAAVLLLELLNKLY 213
W DEC+GEPMPSVKKAKDSAAVLLLELLNK Y
Sbjct: 1929 WTDECIGEPMPSVKKAKDSAAVLLLELLNKWY 1960
>gi|87240866|gb|ABD32724.1| Helicase, C-terminal; Argonaute and Dicer protein,
PAZ; Ribonuclease III, bacterial [Medicago truncatula]
Length = 1939
Score = 171 bits (432), Expect = 2e-041
Identities = 77/93 (82%), Positives = 89/93 (95%)
Frame = -1
Query: 491 EEEDNGKKKKNGSQTFTRQTLNDICLRKNWPIPFYRCVNEGGPAHAKKFTFAVRVNTTDR 312
+E+++ K+ KNG+QTFTRQTLNDICLR+NWP+PFYRCV+EGGPAHAK+FTFAVRVNTTD+
Sbjct: 1845 QEKNDEKETKNGNQTFTRQTLNDICLRRNWPMPFYRCVSEGGPAHAKRFTFAVRVNTTDK 1904
Query: 311 GWIDECVGEPMPSVKKAKDSAAVLLLELLNKLY 213
GW DECVGE MPSVKKAKDSAAVLLLEL+NKLY
Sbjct: 1905 GWTDECVGEAMPSVKKAKDSAAVLLLELINKLY 1937
>gi|15223286|ref|NP_171612.1| DCL1 (DICER-LIKE1); ATP-dependent helicase/
ribonuclease III [Arabidopsis thaliana]
Length = 1909
Score = 164 bits (415), Expect = 2e-039
Identities = 76/96 (79%), Positives = 85/96 (88%), Gaps = 1/96 (1%)
Frame = -1
Query: 500 QEREEEDNGKKKKNGSQTFTRQTLNDICLRKNWPIPFYRCVNEGGPAHAKKFTFAVRVNT 321
+++ E +NG KKNG Q FTRQTLNDICLRKNWP+P YRCV EGGPAHAK+FTF VRVNT
Sbjct: 1814 EDQGENENG-NKKNGHQPFTRQTLNDICLRKNWPMPSYRCVKEGGPAHAKRFTFGVRVNT 1872
Query: 320 TDRGWIDECVGEPMPSVKKAKDSAAVLLLELLNKLY 213
+DRGW DEC+GEPMPSVKKAKDSAAVLLLELLNK +
Sbjct: 1873 SDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNKTF 1908
>gi|6715634|gb|AAF26461.1|AC007323_2 T25K16.4 [Arabidopsis thaliana]
Length = 2024
Score = 164 bits (415), Expect = 2e-039
Identities = 76/96 (79%), Positives = 85/96 (88%), Gaps = 1/96 (1%)
Frame = -1
Query: 500 QEREEEDNGKKKKNGSQTFTRQTLNDICLRKNWPIPFYRCVNEGGPAHAKKFTFAVRVNT 321
+++ E +NG KKNG Q FTRQTLNDICLRKNWP+P YRCV EGGPAHAK+FTF VRVNT
Sbjct: 1929 EDQGENENG-NKKNGHQPFTRQTLNDICLRKNWPMPSYRCVKEGGPAHAKRFTFGVRVNT 1987
Query: 320 TDRGWIDECVGEPMPSVKKAKDSAAVLLLELLNKLY 213
+DRGW DEC+GEPMPSVKKAKDSAAVLLLELLNK +
Sbjct: 1988 SDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNKTF 2023
>gi|6102610|gb|AAF03534.1|AF187317_1 CAF protein [Arabidopsis thaliana]
Length = 1909
Score = 164 bits (415), Expect = 2e-039
Identities = 76/96 (79%), Positives = 85/96 (88%), Gaps = 1/96 (1%)
Frame = -1
Query: 500 QEREEEDNGKKKKNGSQTFTRQTLNDICLRKNWPIPFYRCVNEGGPAHAKKFTFAVRVNT 321
+++ E +NG KKNG Q FTRQTLNDICLRKNWP+P YRCV EGGPAHAK+FTF VRVNT
Sbjct: 1814 EDQGENENG-NKKNGHQPFTRQTLNDICLRKNWPMPSYRCVKEGGPAHAKRFTFGVRVNT 1872
Query: 320 TDRGWIDECVGEPMPSVKKAKDSAAVLLLELLNKLY 213
+DRGW DEC+GEPMPSVKKAKDSAAVLLLELLNK +
Sbjct: 1873 SDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNKTF 1908
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 437,497,710,580
Number of Sequences: 7387702
Number of Extensions: 437497710580
Number of Successful Extensions: 219863961
Number of sequences better than 0.0: 0
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