BLASTX 7.6.2
Query= RU19718 /QuerySize=757
(756 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15234010|ref|NP_195580.1| CSDP2/GRP2 (COLD SHOCK DOMAIN PROTE... 287 1e-075
gi|15226451|ref|NP_179702.1| ATGRP2B (GLYCINE-RICH PROTEIN 2B); ... 276 1e-072
gi|42391858|dbj|BAD08701.1| cold shock domain protein 3 [Triticu... 250 8e-065
gi|147856673|emb|CAN81359.1| hypothetical protein [Vitis vinifera] 231 7e-059
gi|121631|sp|P27484.1|GRP2_NICSY RecName: Full=Glycine-rich prot... 226 2e-057
>gi|15234010|ref|NP_195580.1| CSDP2/GRP2 (COLD SHOCK DOMAIN PROTEIN 2, GLYCINE
RICH PROTEIN 2); nucleic acid binding [Arabidopsis thaliana]
Length = 203
Score = 287 bits (732), Expect = 1e-075
Identities = 136/199 (68%), Positives = 154/199 (77%), Gaps = 12/199 (6%)
Frame = +1
Query: 55 DRLTGTVKWFNDQKGFGFITPADGGEDLFVHQSSIRTEGFRTLGDGESVEFQIETDNDGR 234
+R G+VKWF+ QKGFGFITP DGG+DLFVHQSSIR+EGFR+L E+VEF++E DN+ R
Sbjct: 9 ERRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLAAEEAVEFEVEIDNNNR 68
Query: 235 TKAVDVTGPEEGPVQGRGSGGGGRGGGGRGGGRGGRGGGSYGGGGGYGGGGGGYGGGGGG 414
KA+DV+GP+ PVQG GG GGRGG GGRGGG G GGGYGGGGGGYGG GGG
Sbjct: 69 PKAIDVSGPDGAPVQGNSGGG---SSGGRGGFGGGRGGGR-GSGGGYGGGGGGYGGRGGG 124
Query: 415 G----NCFKCGEAGHMARDCSEGGGSYGGGG---RGGGGYGGGGGGRYSGGGGGGGGASG 573
G +C+KCGE GHMARDCSEGGG YGGGG GGGGYGGGGGG Y GGG GGGG G
Sbjct: 125 GRGGSDCYKCGEPGHMARDCSEGGGGYGGGGGGYGGGGGYGGGGGG-YGGGGRGGGGGGG 183
Query: 574 GCYQCGETGHFARECPNRG 630
CY CGE+GHFAR+C + G
Sbjct: 184 SCYSCGESGHFARDCTSGG 202
>gi|15226451|ref|NP_179702.1| ATGRP2B (GLYCINE-RICH PROTEIN 2B); nucleic acid
binding [Arabidopsis thaliana]
Length = 201
Score = 276 bits (705), Expect = 1e-072
Identities = 136/202 (67%), Positives = 154/202 (76%), Gaps = 13/202 (6%)
Frame = +1
Query: 25 GFSDLSVRMSDRLTGTVKWFNDQKGFGFITPADGGEDLFVHQSSIRTEGFRTLGDGESVE 204
G D+++ DR GTVKWF+ QKGFGFITP+DGG+DLFVHQSSIR+EGFR+L ESVE
Sbjct: 3 GGGDVNMSGGDRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVE 62
Query: 205 FQIETDNDGRTKAVDVTGPEEGPVQGRGSGG---GGRGGGGRGGGR-GGRGGGSYGGGGG 372
F +E DN GR KA++V+GP+ PVQG GG GGRGG G GGGR GGRGGGSYGGG G
Sbjct: 63 FDVEVDNSGRPKAIEVSGPDGAPVQGNSGGGGSSGGRGGFGGGGGRGGGRGGGSYGGGYG 122
Query: 373 YGGGGGGYGGGGGGGNCFKCGEAGHMARDCSEGGGSYGGGGRGGGGYGGGGGGRYSGGGG 552
G G GG GGGGG +CFKCGE GHMAR+CS+GGG Y GGG GGG YG GG GGGG
Sbjct: 123 -GRGSGGRGGGGGDNSCFKCGEPGHMARECSQGGGGYSGGG-GGGRYGSGG-----GGGG 175
Query: 553 GGGGASGGCYQCGETGHFAREC 618
GGGG S CY CGE+GHFAR+C
Sbjct: 176 GGGGLS--CYSCGESGHFARDC 195
>gi|42391858|dbj|BAD08701.1| cold shock domain protein 3 [Triticum aestivum]
Length = 231
Score = 250 bits (638), Expect = 8e-065
Identities = 123/207 (59%), Positives = 145/207 (70%), Gaps = 27/207 (13%)
Frame = +1
Query: 49 MSDRLTGTVKWFNDQKGFGFITPADGGEDLFVHQSSIRTEGFRTLGDGESVEFQIETDND 228
M +R+ GTVKWFN KGFGFI+P DGGEDLFVHQS+I+++G+R+L + ++VEF+I T +D
Sbjct: 1 MGERVKGTVKWFNVTKGFGFISPDDGGEDLFVHQSAIKSDGYRSLNENDAVEFEIITGDD 60
Query: 229 GRTKAVDVTGPEEGPVQG---RGSGGGGRGG----GGRGGGRGGRGGGSYGGGGGYGGGG 387
GRTKA DVT P G + G G GGG RGG GG GGG GG GGG GGGGGYGGGG
Sbjct: 61 GRTKASDVTAPGGGALSGGSRPGEGGGDRGGRGGYGGGGGGYGGGGGGYGGGGGGYGGGG 120
Query: 388 GGY------GGGGGGGNCFKCGEAGHMARDCSEGGGSYGGGGRGGGGYGGGGGGRYSGGG 549
GGY GGGGGG C+KCGE GH++RDC +GGG GGGG GGGGYGGGGGG
Sbjct: 121 GGYGGGGYGGGGGGGRGCYKCGEDGHISRDCPQGGG--GGGGYGGGGYGGGGGG------ 172
Query: 550 GGGGGASGGCYQCGETGHFARECPNRG 630
CY+CGE GH +R+CP G
Sbjct: 173 ------GRECYKCGEEGHISRDCPQGG 193
>gi|147856673|emb|CAN81359.1| hypothetical protein [Vitis vinifera]
Length = 219
Score = 231 bits (587), Expect = 7e-059
Identities = 120/189 (63%), Positives = 130/189 (68%), Gaps = 20/189 (10%)
Frame = +1
Query: 58 RLTGTVKWFNDQKGFGFITPADGGEDLFVHQSSIRTEGFRTLGDGESVEFQIETDNDGRT 237
R+TGTVKWFNDQKGFGFITP DGG+DLFVHQSSIR+EGFR+LG+GE+VEF +E+ +DGRT
Sbjct: 3 RVTGTVKWFNDQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLGEGEAVEFVVESSDDGRT 62
Query: 238 KAVDVTGPEEGPVQGRGSGGGGRGGGGRGGGRGGRGGGSY-GGGGGYGGGGGGYGGGGGG 414
KAVDVTGP+ PVQG GGGGRGG G GG GG GGG Y GGGGGYG GGG GGG G
Sbjct: 63 KAVDVTGPDGNPVQGSRGGGGGRGGRGGGGYGGGGGGGGYGGGGGGYGYNGGGGRGGGRG 122
Query: 415 GNCFKCGEAGHMARDCSEGGGSYGGGGRGGGGYGGGGGGRY---------------SGGG 549
G G G GGG YGGGG GGG GGGGG Y SGGG
Sbjct: 123 GR----GGGGGGRSSGGYGGGGYGGGGGYGGGGGGGGGACYNCGEEGHLARDCSQSSGGG 178
Query: 550 GGGGGASGG 576
GGGG S G
Sbjct: 179 GGGGRYSSG 187
>gi|121631|sp|P27484.1|GRP2_NICSY RecName: Full=Glycine-rich protein 2
Length = 214
Score = 226 bits (574), Expect = 2e-057
Identities = 116/190 (61%), Positives = 127/190 (66%), Gaps = 27/190 (14%)
Frame = +1
Query: 58 RLTGTVKWFNDQKGFGFITPADGGEDLFVHQSSIRTEGFRTLGDGESVEFQIETDNDGRT 237
R GTVKWF+DQKGFGFITP DGGEDLFVHQS IR+EGFR+L +GE+VEF++E+ DGRT
Sbjct: 8 RAKGTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEGFRSLAEGETVEFEVESGGDGRT 67
Query: 238 KAVDVTGPEEGPVQ---GRGSGGGGRGGGGRGGGRGGRGGGSYGGGGGYGGGGGGYGGGG 408
KAVDVTGP+ VQ G G GGGGRGGGG GGG GG GGG GG GYGGG GGYGGGG
Sbjct: 68 KAVDVTGPDGAAVQGGRGGGGGGGGRGGGGYGGGSGGYGGGGRGGSRGYGGGDGGYGGGG 127
Query: 409 GGGNCFKCGEAGHMARDCSEGGGSYGGGGRGGGGYGGGGGGRY--------------SGG 546
G G + G GGG YGGGG GGG GGG G + SGG
Sbjct: 128 GYGGGSRYG----------GGGGGYGGGGGYGGGGSGGGSGCFKCGESGHFARDCSQSGG 177
Query: 547 GGGGGGASGG 576
GGGGG GG
Sbjct: 178 GGGGGRFGGG 187
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 437,497,710,580
Number of Sequences: 7387702
Number of Extensions: 437497710580
Number of Successful Extensions: 219863961
Number of sequences better than 0.0: 0
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