BLASTX 7.6.2
Query= RU19896 /QuerySize=1016
(1015 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|1370174|emb|CAA98164.1| RAB1Y [Lotus japonicus] 366 3e-099
gi|195625924|gb|ACG34792.1| unknown [Zea mays] 363 1e-098
gi|157335088|emb|CAO60918.1| unnamed protein product [Vitis vini... 363 2e-098
gi|15218575|ref|NP_175056.1| ATRAB18 (Arabidopsis Rab GTPase hom... 349 3e-094
gi|116781187|gb|ABK21996.1| unknown [Picea sitchensis] 323 2e-086
>gi|1370174|emb|CAA98164.1| RAB1Y [Lotus japonicus]
Length = 207
Score = 366 bits (937), Expect = 3e-099
Identities = 183/206 (88%), Positives = 196/206 (95%), Gaps = 1/206 (0%)
Frame = +1
Query: 46 SASNQGEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVNVGGKKLK 225
S+S EFDYLFKLLMIGDSGVGKSSLLLSFTSD F+D+SPTIGVDFKVKYV +GGKKLK
Sbjct: 1 SSSAPQEFDYLFKLLMIGDSGVGKSSLLLSFTSDEFQDMSPTIGVDFKVKYVAIGGKKLK 60
Query: 226 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLCDIWAKEIELYSTNQDCIK 405
LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTNL +IWAKEI+LYSTNQDCIK
Sbjct: 61 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEIWAKEIDLYSTNQDCIK 120
Query: 406 MLVGNKVDKESDRVVTKKEGINFARESGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 585
MLVGNKVDKESDRVV+KKEGI+FARE GCLFIECSAKTRVNVQQCFEELVLKILDTPSLL
Sbjct: 121 MLVGNKVDKESDRVVSKKEGIDFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 180
Query: 586 AEGSKGLKKNIFKEK-PQSSAAASSC 660
AEGSKG+KKNIFK+K PQ+ A+ SSC
Sbjct: 181 AEGSKGVKKNIFKDKQPQADASTSSC 206
>gi|195625924|gb|ACG34792.1| unknown [Zea mays]
Length = 215
Score = 363 bits (931), Expect = 1e-098
Identities = 182/214 (85%), Positives = 195/214 (91%), Gaps = 1/214 (0%)
Frame = +1
Query: 22 MKSEMESSSASNQGEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYV 201
M S SSS S Q EFDYLFKLL+IGDSGVGKSSLLL FT+DSFEDLSPTIGVDFKVK V
Sbjct: 1 MDSSSSSSSLSQQPEFDYLFKLLLIGDSGVGKSSLLLRFTADSFEDLSPTIGVDFKVKMV 60
Query: 202 NVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLCDIWAKEIELY 381
+GGKKLKLAIWDTAGQERFRTLTSSYYRGAQG+IMVYDVTRRETFTNL DIWAKEI+LY
Sbjct: 61 TIGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDLY 120
Query: 382 STNQDCIKMLVGNKVDKESDRVVTKKEGINFARESGCLFIECSAKTRVNVQQCFEELVLK 561
STNQDCIKMLVGNKVDKES+R VTKKEGI FARE GCLF+ECSAKT+VNV+QCFEELVLK
Sbjct: 121 STNQDCIKMLVGNKVDKESERAVTKKEGIEFAREYGCLFLECSAKTKVNVEQCFEELVLK 180
Query: 562 ILDTPSLLAEGSKGLKKNIFKEK-PQSSAAASSC 660
ILDTPSLLA+ S G KKNIFK+K P++ AAASSC
Sbjct: 181 ILDTPSLLADASSGAKKNIFKQKPPEADAAASSC 214
>gi|157335088|emb|CAO60918.1| unnamed protein product [Vitis vinifera]
Length = 211
Score = 363 bits (930), Expect = 2e-098
Identities = 179/210 (85%), Positives = 199/210 (94%), Gaps = 1/210 (0%)
Frame = +1
Query: 34 MESSSASNQGEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVNVGG 213
M S+S+Q EFDYLFKLL+IGDSGVGKS+LLLSFTS++FEDLSPTIGVDFKVK+VN+GG
Sbjct: 1 MLPDSSSSQPEFDYLFKLLLIGDSGVGKSTLLLSFTSNTFEDLSPTIGVDFKVKHVNIGG 60
Query: 214 KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLCDIWAKEIELYSTNQ 393
KKLKLAIWDTAGQERFRTLTSSYYRGAQG+IMVYDVTRRETFTNL DIWAKEI+LYSTNQ
Sbjct: 61 KKLKLAIWDTAGQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120
Query: 394 DCIKMLVGNKVDKESDRVVTKKEGINFARESGCLFIECSAKTRVNVQQCFEELVLKILDT 573
DCIKMLVGNKVDKES+RVVTKKEGI+FARE GCLF+ECSAKTRVNV+QCFEELVLKIL+T
Sbjct: 121 DCIKMLVGNKVDKESERVVTKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILET 180
Query: 574 PSLLAEGSKGLKKNIFKEK-PQSSAAASSC 660
PSLLAEGS G++KNIFK+K P+S A+ S C
Sbjct: 181 PSLLAEGSSGVRKNIFKQKPPESDASTSGC 210
>gi|15218575|ref|NP_175056.1| ATRAB18 (Arabidopsis Rab GTPase homolog C1); GTP
binding [Arabidopsis thaliana]
Length = 212
Score = 349 bits (894), Expect = 3e-094
Identities = 171/206 (83%), Positives = 190/206 (92%)
Frame = +1
Query: 46 SASNQGEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVNVGGKKLK 225
S+S Q EFDYLFK+L+IGDSGVGKSSLLLSFTS++F+DLSPTIGVDFKVKY+ +G KKLK
Sbjct: 3 SSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKKLK 62
Query: 226 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLCDIWAKEIELYSTNQDCIK 405
LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTNL DIWAKEI+LYSTNQDCIK
Sbjct: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIK 122
Query: 406 MLVGNKVDKESDRVVTKKEGINFARESGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 585
MLVGNKVDKES+R V+KKEGI+FARE GCLF+ECSAKTRVNV+QCFEELVLKIL+TPSL
Sbjct: 123 MLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLT 182
Query: 586 AEGSKGLKKNIFKEKPQSSAAASSCY 663
AEGS G KKNIFK+ P + + SS Y
Sbjct: 183 AEGSSGGKKNIFKQNPAQTTSTSSSY 208
>gi|116781187|gb|ABK21996.1| unknown [Picea sitchensis]
Length = 208
Score = 323 bits (827), Expect = 2e-086
Identities = 153/206 (74%), Positives = 183/206 (88%)
Frame = +1
Query: 43 SSASNQGEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVNVGGKKL 222
+S+++QG+FD++FKLLMIGDSGVGKSSLLL FTSDSF+DLSPTIGVDFK+K + + GK+L
Sbjct: 2 ASSTSQGDFDHVFKLLMIGDSGVGKSSLLLRFTSDSFDDLSPTIGVDFKLKLMTIAGKRL 61
Query: 223 KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLCDIWAKEIELYSTNQDCI 402
KL IWDTAGQERFRTLTSSYYRGAQGII VYDVTRRETFTNL ++WAKE++LYSTNQDCI
Sbjct: 62 KLTIWDTAGQERFRTLTSSYYRGAQGIIFVYDVTRRETFTNLSEVWAKEVDLYSTNQDCI 121
Query: 403 KMLVGNKVDKESDRVVTKKEGINFARESGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 582
KMLVGNKVD+E++RVV+KKEGI AR+ GCLF+ECSAKT VNV+ CFEELVLKILDTP+L
Sbjct: 122 KMLVGNKVDRETERVVSKKEGIALARQMGCLFLECSAKTHVNVENCFEELVLKILDTPNL 181
Query: 583 LAEGSKGLKKNIFKEKPQSSAAASSC 660
L + + +KNIFK+ + A + SC
Sbjct: 182 LQDSATAARKNIFKQNQANDANSGSC 207
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 437,497,710,580
Number of Sequences: 7387702
Number of Extensions: 437497710580
Number of Successful Extensions: 219863961
Number of sequences better than 0.0: 0
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