BLASTX 7.6.2
Query= RU20112 /QuerySize=338
(337 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|118488417|gb|ABK96024.1| unknown [Populus trichocarpa] 125 1e-027
gi|112363362|gb|ABI16005.1| Dof4 [Glycine max] 112 6e-024
gi|112363400|gb|ABI16024.1| Dof22 [Glycine max] 110 4e-023
gi|15239449|ref|NP_200893.1| OBP4 (OBF BINDING PROTEIN 4); DNA b... 96 5e-019
gi|37051127|dbj|BAC81660.1| DNA binding with one finger 3 protei... 79 1e-013
>gi|118488417|gb|ABK96024.1| unknown [Populus trichocarpa]
Length = 321
Score = 125 bits (312), Expect = 1e-027
Identities = 55/64 (85%), Positives = 57/64 (89%), Gaps = 2/64 (3%)
Frame = +1
Query: 151 MQDIQSI--GGRFFGGAGGGDRRLRPHHNQNHQALKCPRCDSINTKFCYYNNYNLSQPRH 324
MQD SI GGR F G GGGDRRLRPHH+QNHQALKCPRCDS+NTKFCYYNNYNLSQPRH
Sbjct: 1 MQDTHSIGGGGRLFSGGGGGDRRLRPHHHQNHQALKCPRCDSLNTKFCYYNNYNLSQPRH 60
Query: 325 FCKS 336
FCKS
Sbjct: 61 FCKS 64
>gi|112363362|gb|ABI16005.1| Dof4 [Glycine max]
Length = 300
Score = 112 bits (280), Expect = 6e-024
Identities = 51/63 (80%), Positives = 55/63 (87%), Gaps = 2/63 (3%)
Frame = +1
Query: 151 MQDIQSI-GGRFFGGAGGGDRRLRPHHNQNHQALKCPRCDSINTKFCYYNNYNLSQPRHF 327
MQ I S+ GGRFF G+G DRRLRPHH QN QALKCPRCDS+NTKFCYYNNYNLSQPRHF
Sbjct: 1 MQQIHSMPGGRFFSGSGSADRRLRPHH-QNQQALKCPRCDSLNTKFCYYNNYNLSQPRHF 59
Query: 328 CKS 336
CK+
Sbjct: 60 CKN 62
>gi|112363400|gb|ABI16024.1| Dof22 [Glycine max]
Length = 341
Score = 110 bits (273), Expect = 4e-023
Identities = 51/65 (78%), Positives = 56/65 (86%), Gaps = 5/65 (7%)
Frame = +1
Query: 151 MQDIQSI-GGRFFGGAGGGDRRLRPHHNQNHQ--ALKCPRCDSINTKFCYYNNYNLSQPR 321
MQ+I SI GGRFFG GGGDRRLRPHH +HQ +KCPRCDS+NTKFCYYNNYNLSQPR
Sbjct: 1 MQEIHSIGGGRFFG--GGGDRRLRPHHQNHHQQPPIKCPRCDSLNTKFCYYNNYNLSQPR 58
Query: 322 HFCKS 336
HFCK+
Sbjct: 59 HFCKN 63
>gi|15239449|ref|NP_200893.1| OBP4 (OBF BINDING PROTEIN 4); DNA binding /
transcription factor [Arabidopsis thaliana]
Length = 307
Score = 96 bits (238), Expect = 5e-019
Identities = 41/57 (71%), Positives = 47/57 (82%), Gaps = 3/57 (5%)
Frame = +1
Query: 175 GRFFGGAGGGDRRLRPHHN---QNHQALKCPRCDSINTKFCYYNNYNLSQPRHFCKS 336
G GG GGGDRR+R H N +HQ+LKCPRC+S+NTKFCYYNNYNLSQPRHFCK+
Sbjct: 24 GGGIGGGGGGDRRMRAHQNNILNHHQSLKCPRCNSLNTKFCYYNNYNLSQPRHFCKN 80
>gi|37051127|dbj|BAC81660.1| DNA binding with one finger 3 protein [Pisum
sativum]
Length = 290
Score = 79 bits (192), Expect = 1e-013
Identities = 34/46 (73%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Frame = +1
Query: 202 GDRRLRPHH-NQNHQALKCPRCDSINTKFCYYNNYNLSQPRHFCKS 336
G L+ HH Q QALKCPRCDS NTKFCYYNNY+LSQPRHFCK+
Sbjct: 5 GQELLQQHHQQQQQQALKCPRCDSSNTKFCYYNNYSLSQPRHFCKA 50
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 437,497,710,580
Number of Sequences: 7387702
Number of Extensions: 437497710580
Number of Successful Extensions: 219863961
Number of sequences better than 0.0: 0
|