BLASTX 7.6.2
Query= RU20508 /QuerySize=729
(728 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|118483978|gb|ABK93876.1| unknown [Populus trichocarpa] 108 6e-022
gi|157350763|emb|CAO40854.1| unnamed protein product [Vitis vini... 96 3e-018
gi|4678939|emb|CAB41330.1| putative protein [Arabidopsis thaliana] 88 6e-016
gi|42572639|ref|NP_974415.1| unknown protein [Arabidopsis thaliana] 86 2e-015
>gi|118483978|gb|ABK93876.1| unknown [Populus trichocarpa]
Length = 69
Score = 108 bits (268), Expect = 6e-022
Identities = 49/65 (75%), Positives = 56/65 (86%)
Frame = -3
Query: 492 MFLQLFFTVAFSAVPLTLYVPPLRSLNPFVETMEDLMLESRTYTNRVYPRVRHIWRRILD 313
M LQL FTVAFSAVPLTLY+PP+RSLN FVETMEDL+ ESR YT R+YPR RH+W R+LD
Sbjct: 1 MMLQLLFTVAFSAVPLTLYIPPVRSLNLFVETMEDLLRESRVYTGRLYPRARHVWSRVLD 60
Query: 312 CLLCS 298
LLC+
Sbjct: 61 ILLCN 65
>gi|157350763|emb|CAO40854.1| unnamed protein product [Vitis vinifera]
Length = 73
Score = 96 bits (236), Expect = 3e-018
Identities = 44/63 (69%), Positives = 55/63 (87%)
Frame = -3
Query: 486 LQLFFTVAFSAVPLTLYVPPLRSLNPFVETMEDLMLESRTYTNRVYPRVRHIWRRILDCL 307
LQLFF VAFS+VPLTLY+PPLRSLN FVETMED++ E+ +T+R+YPRVR + RILDC+
Sbjct: 2 LQLFFAVAFSSVPLTLYIPPLRSLNLFVETMEDIVRETSMHTDRLYPRVRQAFFRILDCM 61
Query: 306 LCS 298
LC+
Sbjct: 62 LCN 64
>gi|4678939|emb|CAB41330.1| putative protein [Arabidopsis thaliana]
Length = 763
Score = 88 bits (216), Expect = 6e-016
Identities = 44/87 (50%), Positives = 57/87 (65%), Gaps = 5/87 (5%)
Frame = -3
Query: 540 LGKLGF-----DQFR*KIRAEMFLQLFFTVAFSAVPLTLYVPPLRSLNPFVETMEDLMLE 376
LGK G Q R + + LQLFFT+AFSA PLTLY+PP+R L FVETME++ +E
Sbjct: 672 LGKQGVRFVPQKQKRTRTEEKKMLQLFFTIAFSAAPLTLYIPPIRCLTVFVETMEEMGME 731
Query: 375 SRTYTNRVYPRVRHIWRRILDCLLCST 295
R Y+ R++PR R W R+LDC S+
Sbjct: 732 GRVYSWRLFPRARIAWSRLLDCFFSSS 758
>gi|42572639|ref|NP_974415.1| unknown protein [Arabidopsis thaliana]
Length = 70
Score = 86 bits (212), Expect = 2e-015
Identities = 38/64 (59%), Positives = 49/64 (76%)
Frame = -3
Query: 486 LQLFFTVAFSAVPLTLYVPPLRSLNPFVETMEDLMLESRTYTNRVYPRVRHIWRRILDCL 307
LQLFFT+AFSA PLTLY+PP+R L FVETME++ +E R Y+ R++PR R W R+LDC
Sbjct: 2 LQLFFTIAFSAAPLTLYIPPIRCLTVFVETMEEMGMEGRVYSWRLFPRARIAWSRLLDCF 61
Query: 306 LCST 295
S+
Sbjct: 62 FSSS 65
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 437,497,710,580
Number of Sequences: 7387702
Number of Extensions: 437497710580
Number of Successful Extensions: 219863961
Number of sequences better than 0.0: 0
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