BLASTX 7.6.2
Query= RU20604 /QuerySize=748
(747 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|147794982|emb|CAN71764.1| hypothetical protein [Vitis vinifera] 131 9e-029
gi|157342968|emb|CAO65680.1| unnamed protein product [Vitis vini... 130 2e-028
gi|15241288|ref|NP_197518.1| ribosomal protein L36 family protei... 120 1e-025
gi|189096154|pdb|3BBO|6 Chain 6, Homology Model For The Spinach ... 116 3e-024
gi|118481183|gb|ABK92543.1| unknown [Populus trichocarpa] 110 2e-022
>gi|147794982|emb|CAN71764.1| hypothetical protein [Vitis vinifera]
Length = 100
Score = 131 bits (327), Expect = 9e-029
Identities = 67/101 (66%), Positives = 78/101 (77%), Gaps = 4/101 (3%)
Frame = +2
Query: 116 MKVRSSVKKMCEFCKTIKRRGRVYVYCTANPKHKQRQGMSTFAYQGTDAPMSAETSITKQ 295
MKVRSSVKKMCE+C+T+KRRGRVYV CTANPKHKQRQGMSTFA++G PMS+E + KQ
Sbjct: 1 MKVRSSVKKMCEYCRTVKRRGRVYVLCTANPKHKQRQGMSTFAHEGPLPPMSSEMN-AKQ 59
Query: 296 ENNFGQSSHVGLASLIPRKNEPSMPSPTLGWRVGLASLLFR 418
E + GLAS+IP+K EPSM GWR LASLLF+
Sbjct: 60 EISXNHRLQGGLASIIPKKPEPSM---MYGWRASLASLLFK 97
>gi|157342968|emb|CAO65680.1| unnamed protein product [Vitis vinifera]
Length = 100
Score = 130 bits (325), Expect = 2e-028
Identities = 67/101 (66%), Positives = 78/101 (77%), Gaps = 4/101 (3%)
Frame = +2
Query: 116 MKVRSSVKKMCEFCKTIKRRGRVYVYCTANPKHKQRQGMSTFAYQGTDAPMSAETSITKQ 295
MKVRSSVKKMCE+C+T+KRRGRVYV CTANPKHKQRQGMSTFA++G PMS+E + KQ
Sbjct: 1 MKVRSSVKKMCEYCRTVKRRGRVYVLCTANPKHKQRQGMSTFAHEGPLPPMSSEMN-AKQ 59
Query: 296 ENNFGQSSHVGLASLIPRKNEPSMPSPTLGWRVGLASLLFR 418
E + GLAS+IP+K EPSM GWR LASLLF+
Sbjct: 60 EISRNHRLQGGLASIIPKKPEPSM---MYGWRASLASLLFK 97
>gi|15241288|ref|NP_197518.1| ribosomal protein L36 family protein [Arabidopsis
thaliana]
Length = 103
Score = 120 bits (300), Expect = 1e-025
Identities = 62/106 (58%), Positives = 79/106 (74%), Gaps = 5/106 (4%)
Frame = +2
Query: 116 MKVRSSVKKMCEFCKTIKRRGRVYVYCTANPKHKQRQGMSTFAYQG-TDAPMSAETSITK 292
MKVRSSVKKMCEFCKT+KRRGRVYV C++NPKHKQRQG S+FAY+G T +P+ AE ++
Sbjct: 1 MKVRSSVKKMCEFCKTVKRRGRVYVICSSNPKHKQRQGFSSFAYEGITPSPLFAEPIASQ 60
Query: 293 QENNF-GQSSHVGLASLIPRKNEPSMPSPTLGWRVGLASLLFRKAN 427
+ GQ GLASL+ ++ MP+ GWR GLAS+LF++ N
Sbjct: 61 ELVRLPGQGVSAGLASLLHKR---PMPTAYFGWRSGLASILFKQGN 103
>gi|189096154|pdb|3BBO|6 Chain 6, Homology Model For The Spinach Chloroplast 50s
Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
Length = 104
Score = 116 bits (288), Expect = 3e-024
Identities = 62/107 (57%), Positives = 79/107 (73%), Gaps = 6/107 (5%)
Frame = +2
Query: 116 MKVRSSVKKMCEFCKTIKRRGRVYVYCTANPKHKQRQ-GMSTFAYQG-TDAPMSAETSIT 289
MKVRSSVKKMCEFCKT+KRRGRVYV C++NPKHKQRQ G S+FAY+G T +P+ AE +
Sbjct: 1 MKVRSSVKKMCEFCKTVKRRGRVYVICSSNPKHKQRQGGFSSFAYEGITPSPLFAEPIAS 60
Query: 290 KQENNF-GQSSHVGLASLIPRKNEPSMPSPTLGWRVGLASLLFRKAN 427
++ GQ GLASL+ ++ MP+ GWR GLAS+LF++ N
Sbjct: 61 QELVRLPGQGVSAGLASLLHKR---PMPTAYFGWRSGLASILFKQGN 104
>gi|118481183|gb|ABK92543.1| unknown [Populus trichocarpa]
Length = 97
Score = 110 bits (273), Expect = 2e-022
Identities = 58/97 (59%), Positives = 71/97 (73%), Gaps = 7/97 (7%)
Frame = +2
Query: 116 MKVRSSVKKMCEFCKTIKRRGRVYVYCTANPKHKQRQGMSTFAYQGTDAPMSAETSITKQ 295
MKVRSSVKKMCEFC+ +KRRGR+YV C++NPKHKQRQG +TFAY G +SAET+ +
Sbjct: 1 MKVRSSVKKMCEFCQIVKRRGRIYVICSSNPKHKQRQGFATFAYSGL---ISAETTAPPR 57
Query: 296 ENNFGQSSHVGLASLIPRKNEPSMPSPTLGWRVGLAS 406
QS +GLASL+P+K E PS GWR GL+S
Sbjct: 58 IVP-SQSMGIGLASLLPKKYE---PSTMYGWRAGLSS 90
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 437,497,710,580
Number of Sequences: 7387702
Number of Extensions: 437497710580
Number of Successful Extensions: 219863961
Number of sequences better than 0.0: 0
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