BLASTX 7.6.2
Query= RU20607 /QuerySize=275
(274 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157336068|emb|CAO61898.1| unnamed protein product [Vitis vini... 137 3e-031
gi|15219067|ref|NP_173589.1| ATSWI3C (Arabidopsis thaliana switc... 107 3e-022
gi|125533645|gb|EAY80193.1| hypothetical protein OsI_034152 [Ory... 101 3e-020
gi|115484499|ref|NP_001065911.1| Os11g0183700 [Oryza sativa (jap... 99 1e-019
gi|108864074|gb|ABG22394.1| SWIRM domain containing protein, exp... 99 1e-019
>gi|157336068|emb|CAO61898.1| unnamed protein product [Vitis vinifera]
Length = 726
Score = 137 bits (343), Expect = 3e-031
Identities = 67/90 (74%), Positives = 75/90 (83%)
Frame = +3
Query: 3 QETLLLLEAMEIYNENWNEIAEHVGTKSKAQCILHFLRLPVEDGLLENIEVPKMPLSSNS 182
QETLLLLEAME YNENWN+IAEHVGTKSKAQCILHF+R+P+EDGLLENIEVP MP SNS
Sbjct: 341 QETLLLLEAMESYNENWNDIAEHVGTKSKAQCILHFIRMPMEDGLLENIEVPSMPTLSNS 400
Query: 183 SDRDDHGGFYSTSNGNSAGSCLQDGDSESR 272
++ D +S SNGN AGSCL DS+SR
Sbjct: 401 LNKVDQERSHSNSNGNLAGSCLPGLDSDSR 430
>gi|15219067|ref|NP_173589.1| ATSWI3C (Arabidopsis thaliana switching protein
3C); DNA binding
Length = 807
Score = 107 bits (266), Expect = 3e-022
Identities = 54/88 (61%), Positives = 68/88 (77%), Gaps = 2/88 (2%)
Frame = +3
Query: 3 QETLLLLEAMEIYNENWNEIAEHVGTKSKAQCILHFLRLPVEDGLLENIEVPKMPLSSNS 182
QETLLLLEA+E+YNENW +IA+HVG+KSKAQCILHFLRLPVEDGLL+N+EV + + N
Sbjct: 406 QETLLLLEAVELYNENWVQIADHVGSKSKAQCILHFLRLPVEDGLLDNVEVSGVTNTENP 465
Query: 183 SDRDDHGGFYSTSNGNSAGSCLQDGDSE 266
++ DH G + SNG+ G Q D+E
Sbjct: 466 TNGYDHKG--TDSNGDLPGYSEQGSDTE 491
>gi|125533645|gb|EAY80193.1| hypothetical protein OsI_034152 [Oryza sativa
(indica cultivar-group)]
Length = 809
Score = 101 bits (249), Expect = 3e-020
Identities = 51/83 (61%), Positives = 64/83 (77%), Gaps = 3/83 (3%)
Frame = +3
Query: 3 QETLLLLEAMEIYNENWNEIAEHVGTKSKAQCILHFLRLPVEDGLLENIEVPKMPLSSNS 182
QETLLLLE +E YN+NWN IAEHVGTKSKAQCI HF+RLPVEDGLLENIEVP + + +
Sbjct: 444 QETLLLLEGIEKYNDNWNNIAEHVGTKSKAQCIYHFIRLPVEDGLLENIEVPDVFVPFRA 503
Query: 183 SDRDDHGGFYSTSNGNSAGSCLQ 251
+ +G +S NG+++G+ Q
Sbjct: 504 ---ETNGYPHSDCNGSTSGNLPQ 523
>gi|115484499|ref|NP_001065911.1| Os11g0183700 [Oryza sativa (japonica
cultivar-group)]
Length = 784
Score = 99 bits (244), Expect = 1e-019
Identities = 50/83 (60%), Positives = 62/83 (74%), Gaps = 3/83 (3%)
Frame = +3
Query: 3 QETLLLLEAMEIYNENWNEIAEHVGTKSKAQCILHFLRLPVEDGLLENIEVPKMPLSSNS 182
QETLLLLE +E YN+NWN IAEHVGTKSKAQCI HF+RLPVEDGLLENIEVP + +
Sbjct: 421 QETLLLLEGIEKYNDNWNNIAEHVGTKSKAQCIYHFIRLPVEDGLLENIEVPDASVPFRA 480
Query: 183 SDRDDHGGFYSTSNGNSAGSCLQ 251
+ +G + NG+++G+ Q
Sbjct: 481 ---ETNGYPHLDCNGSTSGNLPQ 500
>gi|108864074|gb|ABG22394.1| SWIRM domain containing protein, expressed [Oryza
sativa (japonica cultivar-group)]
Length = 651
Score = 99 bits (244), Expect = 1e-019
Identities = 50/83 (60%), Positives = 62/83 (74%), Gaps = 3/83 (3%)
Frame = +3
Query: 3 QETLLLLEAMEIYNENWNEIAEHVGTKSKAQCILHFLRLPVEDGLLENIEVPKMPLSSNS 182
QETLLLLE +E YN+NWN IAEHVGTKSKAQCI HF+RLPVEDGLLENIEVP + +
Sbjct: 421 QETLLLLEGIEKYNDNWNNIAEHVGTKSKAQCIYHFIRLPVEDGLLENIEVPDASVPFRA 480
Query: 183 SDRDDHGGFYSTSNGNSAGSCLQ 251
+ +G + NG+++G+ Q
Sbjct: 481 ---ETNGYPHLDCNGSTSGNLPQ 500
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 437,497,710,580
Number of Sequences: 7387702
Number of Extensions: 437497710580
Number of Successful Extensions: 219863961
Number of sequences better than 0.0: 0
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