Blast details for RU20805 (GenBank)


BLASTX 7.6.2

Query= RU20805 /QuerySize=345
        (344 letters)

Database: GenBank nr;
          7,387,702 sequences; 2,551,671,255 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|157359556|emb|CAO67768.1| unnamed protein product [Vitis vini...    162   7e-039
gi|18390573|ref|NP_563749.1| basic helix-loop-helix (bHLH) famil...    158   1e-037
gi|21554238|gb|AAM63313.1| Contains similarity to bHLH transcrip...    158   1e-037
gi|38345229|emb|CAE01659.2| OSJNBa0084K20.3 [Oryza sativa (japon...    133   3e-030
gi|115459116|ref|NP_001053158.1| Os04g0489600 [Oryza sativa (jap...    133   3e-030

>gi|157359556|emb|CAO67768.1| unnamed protein product [Vitis vinifera]

          Length = 353

 Score =  162 bits (409), Expect = 7e-039
 Identities = 76/82 (92%), Positives = 80/82 (97%)
 Frame = +1

Query:   1 DSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHI 180
           DSVPCK+RAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHI
Sbjct: 269 DSVPCKVRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHI 328

Query: 181 KGLQNQVQNLHKDLEGCTCGCK 246
           KGLQN+VQ L+K+LE CTCGCK
Sbjct: 329 KGLQNEVQKLNKELENCTCGCK 350

>gi|18390573|ref|NP_563749.1| basic helix-loop-helix (bHLH) family protein
        [Arabidopsis thaliana]

          Length = 362

 Score =  158 bits (399), Expect = 1e-037
 Identities = 75/81 (92%), Positives = 78/81 (96%)
 Frame = +1

Query:   1 DSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHI 180
           DSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSY+DMLDLAVQHI
Sbjct: 277 DSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHI 336

Query: 181 KGLQNQVQNLHKDLEGCTCGC 243
           KGLQ+Q+QNL KD E CTCGC
Sbjct: 337 KGLQHQLQNLKKDQENCTCGC 357

>gi|21554238|gb|AAM63313.1| Contains similarity to bHLH transcription factor
        GBOF-1 from Tulipa gesneriana gb|AF185269 [Arabidopsis thaliana]

          Length = 362

 Score =  158 bits (399), Expect = 1e-037
 Identities = 75/81 (92%), Positives = 78/81 (96%)
 Frame = +1

Query:   1 DSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHI 180
           DSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSY+DMLDLAVQHI
Sbjct: 277 DSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHI 336

Query: 181 KGLQNQVQNLHKDLEGCTCGC 243
           KGLQ+Q+QNL KD E CTCGC
Sbjct: 337 KGLQHQLQNLKKDQENCTCGC 357

>gi|38345229|emb|CAE01659.2| OSJNBa0084K20.3 [Oryza sativa (japonica
        cultivar-group)]

          Length = 218

 Score =  133 bits (334), Expect = 3e-030
 Identities = 64/82 (78%), Positives = 71/82 (86%)
 Frame = +1

Query:   1 DSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHI 180
           D VP ++RAKRGCATHPRSIAERERRTRIS KL+KLQ LVPNMDKQTS +DMLDLAV HI
Sbjct: 128 DQVPFRVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHI 187

Query: 181 KGLQNQVQNLHKDLEGCTCGCK 246
           KGLQ+Q+Q L +D E CTC CK
Sbjct: 188 KGLQSQLQTLKEDKEKCTCSCK 209

>gi|115459116|ref|NP_001053158.1| Os04g0489600 [Oryza sativa (japonica
        cultivar-group)]

          Length = 369

 Score =  133 bits (334), Expect = 3e-030
 Identities = 64/82 (78%), Positives = 71/82 (86%)
 Frame = +1

Query:   1 DSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHI 180
           D VP ++RAKRGCATHPRSIAERERRTRIS KL+KLQ LVPNMDKQTS +DMLDLAV HI
Sbjct: 279 DQVPFRVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHI 338

Query: 181 KGLQNQVQNLHKDLEGCTCGCK 246
           KGLQ+Q+Q L +D E CTC CK
Sbjct: 339 KGLQSQLQTLKEDKEKCTCSCK 360

  Database: GenBank nr
    Posted date:  Wed Dec 03 02:04:20 2008
  Number of letters in database: 2,551,671,255
  Number of sequences in database:  7,387,702

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 437,497,710,580
Number of Sequences: 7387702
Number of Extensions: 437497710580
Number of Successful Extensions: 219863961
Number of sequences better than 0.0: 0