BLASTX 7.6.2
Query= RU21342 /QuerySize=618
(617 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|147791077|emb|CAN68018.1| hypothetical protein [Vitis vinifera] 363 6e-099
gi|171452362|dbj|BAG15872.1| transcription factor [Bruguiera gym... 334 3e-090
gi|15237721|ref|NP_200670.1| zinc finger (CCCH-type) family prot... 285 3e-075
gi|147866118|emb|CAN78824.1| hypothetical protein [Vitis vinifera] 221 5e-056
gi|124360202|gb|ABN08215.1| Zinc finger, CCCH-type [Medicago tru... 211 3e-053
>gi|147791077|emb|CAN68018.1| hypothetical protein [Vitis vinifera]
Length = 674
Score = 363 bits (931), Expect = 6e-099
Identities = 170/207 (82%), Positives = 188/207 (90%), Gaps = 5/207 (2%)
Frame = +1
Query: 1 SGKVDVNRSCGSDRVTALHCATAGGSSSSLEVVKLLLDACADANCVTANGNKPVDLIAPA 180
+GKVDVNR+CGSD+VTALHCA AGGS SSLEVVKLLLDA ADANCV NGNKPVD+IAPA
Sbjct: 84 TGKVDVNRACGSDQVTALHCAAAGGSVSSLEVVKLLLDASADANCVDCNGNKPVDMIAPA 143
Query: 181 LKSPCNSRRKAMEMLLKGDMSLLGSDIDDQEVPSL--QLLKEGSEKKEYPIDIALPDINN 354
LKS CNSRR+A EMLL+GD + ++++++ PS QL KEGSEKKEYPIDI+LPDINN
Sbjct: 144 LKSSCNSRRRATEMLLRGDQVI---ELEEEQQPSTAPQLSKEGSEKKEYPIDISLPDINN 200
Query: 355 GIYGSDEFRMYTFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYPYSCVPCPEFRKGS 534
GIYG+DEFRMYTFKVKPCSRAYSHDWTECPFVHPGENARRRDP+K+PYSCVPCPE+RKGS
Sbjct: 201 GIYGTDEFRMYTFKVKPCSRAYSHDWTECPFVHPGENARRRDPKKFPYSCVPCPEYRKGS 260
Query: 535 CQKGDVCEYAHGVFESWLHPAQYRTRL 615
CQKGD CEYAHGVFE WLHPAQYRTRL
Sbjct: 261 CQKGDSCEYAHGVFECWLHPAQYRTRL 287
>gi|171452362|dbj|BAG15872.1| transcription factor [Bruguiera gymnorhiza]
Length = 661
Score = 334 bits (856), Expect = 3e-090
Identities = 155/205 (75%), Positives = 179/205 (87%), Gaps = 3/205 (1%)
Frame = +1
Query: 1 SGKVDVNRSCGSDRVTALHCATAGGSSSSLEVVKLLLDACADANCVTANGNKPVDLIAPA 180
+GK+D+NR+CGSD+VTALHCA AGG++SS E VKLLLDA ADAN V ANGNKP DL +
Sbjct: 84 TGKIDINRACGSDKVTALHCAVAGGANSSAETVKLLLDASADANLVDANGNKPGDLTL-S 142
Query: 181 LKSPCNSRRKAMEMLLKGDMSLLGSDIDDQEVPSLQLLKEGSEKKEYPIDIALPDINNGI 360
LK NSR+K +E+LL+G+ L D +++ + QL+KEG+EKKEYPIDI LPDINNGI
Sbjct: 143 LKFSYNSRKKLIELLLRGES--LSKDEEEKLATTPQLMKEGTEKKEYPIDITLPDINNGI 200
Query: 361 YGSDEFRMYTFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYPYSCVPCPEFRKGSCQ 540
YG+DEFRMY+FK+KPCSRAYSHDWTECPFVHPGENARRRDPRKYPYSCVPCPEFRKG+CQ
Sbjct: 201 YGTDEFRMYSFKIKPCSRAYSHDWTECPFVHPGENARRRDPRKYPYSCVPCPEFRKGACQ 260
Query: 541 KGDVCEYAHGVFESWLHPAQYRTRL 615
KGD C+YAHGVFESWLHPAQYRTRL
Sbjct: 261 KGDACDYAHGVFESWLHPAQYRTRL 285
>gi|15237721|ref|NP_200670.1| zinc finger (CCCH-type) family protein
[Arabidopsis thaliana]
Length = 607
Score = 285 bits (727), Expect = 3e-075
Identities = 133/205 (64%), Positives = 157/205 (76%), Gaps = 5/205 (2%)
Frame = +1
Query: 16 VNRSCGSDRVTALHCATAGGSSSSLEVVKLLLDACADANCVTANGNKPVDLIAPALKSPC 195
VNRSCGSD TALHCA +G S++SLE+V LLL A+ + A GNKP D+I P L
Sbjct: 85 VNRSCGSDGATALHCAVSGLSANSLEIVTLLLKGSANPDSCDAYGNKPGDVIFPCLSPVF 144
Query: 196 NSRRKAMEMLLKGDMSLLGSDIDDQEVPSLQLLKE-----GSEKKEYPIDIALPDINNGI 360
++R K +E LLKG+ L + ++ P +++ E GSE+KEYP+D LPDI NG+
Sbjct: 145 SARMKVLERLLKGNDDLNEVNGQEESEPEVEVEVEVSPPRGSERKEYPVDPTLPDIKNGV 204
Query: 361 YGSDEFRMYTFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYPYSCVPCPEFRKGSCQ 540
YG+DEFRMY FK+KPCSRAYSHDWTECPFVHPGENARRRDPRKY YSCVPCPEFRKGSC
Sbjct: 205 YGTDEFRMYAFKIKPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEFRKGSCS 264
Query: 541 KGDVCEYAHGVFESWLHPAQYRTRL 615
+GD CEYAHG+FE WLHPAQYRTRL
Sbjct: 265 RGDTCEYAHGIFECWLHPAQYRTRL 289
>gi|147866118|emb|CAN78824.1| hypothetical protein [Vitis vinifera]
Length = 893
Score = 221 bits (561), Expect = 5e-056
Identities = 97/133 (72%), Positives = 111/133 (83%)
Frame = +1
Query: 217 EMLLKGDMSLLGSDIDDQEVPSLQLLKEGSEKKEYPIDIALPDINNGIYGSDEFRMYTFK 396
E + D ++ + Q+ S+Q + EKKEYP+D++LPDI NGIYG+DEFRMYTFK
Sbjct: 366 EACVLSDQTVDDMEEQQQQEISVQRVYGTPEKKEYPVDLSLPDIKNGIYGTDEFRMYTFK 425
Query: 397 VKPCSRAYSHDWTECPFVHPGENARRRDPRKYPYSCVPCPEFRKGSCQKGDVCEYAHGVF 576
VKPCSRAYSHDWTECPFVHPGENARRRDPRKY YSCVPCPEFRKGSC++GD CEYAHG+F
Sbjct: 426 VKPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEFRKGSCRQGDACEYAHGIF 485
Query: 577 ESWLHPAQYRTRL 615
E WLHPAQYRTRL
Sbjct: 486 ECWLHPAQYRTRL 498
>gi|124360202|gb|ABN08215.1| Zinc finger, CCCH-type [Medicago truncatula]
Length = 734
Score = 211 bits (537), Expect = 3e-053
Identities = 89/105 (84%), Positives = 99/105 (94%)
Frame = +1
Query: 301 GSEKKEYPIDIALPDINNGIYGSDEFRMYTFKVKPCSRAYSHDWTECPFVHPGENARRRD 480
GSEKKEYP+D +LPDI N IY +DEFRMY+FKV+PCSRAYSHDWTECPFVHPGENARRRD
Sbjct: 240 GSEKKEYPVDPSLPDIKNSIYSTDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRD 299
Query: 481 PRKYPYSCVPCPEFRKGSCQKGDVCEYAHGVFESWLHPAQYRTRL 615
PRKY YSCVPCP+FRKG+C++GD+CEYAHGVFE WLHPAQYRTRL
Sbjct: 300 PRKYHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRL 344
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 444,043,032,525
Number of Sequences: 7387702
Number of Extensions: 444043032525
Number of Successful Extensions: 227683287
Number of sequences better than 0.0: 0
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