BLASTX 7.6.2
Query= RU22104 /QuerySize=770
(769 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|147864853|emb|CAN79376.1| hypothetical protein [Vitis vinifera] 264 7e-069
gi|84626822|gb|ABC59814.1| small GTPase Rab5b [Nicotiana tabacum] 255 3e-066
gi|118488888|gb|ABK96253.1| unknown [Populus trichocarpa x Popul... 255 4e-066
gi|1370180|emb|CAA98167.1| RAB5B [Lotus japonicus] 250 1e-064
gi|18410144|ref|NP_567008.1| ARA6; GTP binding [Arabidopsis thal... 244 8e-063
>gi|147864853|emb|CAN79376.1| hypothetical protein [Vitis vinifera]
Length = 200
Score = 264 bits (673), Expect = 7e-069
Identities = 132/140 (94%), Positives = 135/140 (96%)
Frame = -3
Query: 422 DRGSGRLVGPNVENGGAADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGAS 243
DR SGRL G N ENGGA DAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGAS
Sbjct: 9 DRNSGRLGGLNAENGGAPDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGAS 68
Query: 242 FLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPESFNKAQYWV 63
FLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAV+VYDITSPESFNKAQYWV
Sbjct: 69 FLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITSPESFNKAQYWV 128
Query: 62 KELQKHGTPDIVLALVGNKA 3
KELQKHG+PDIV+ALVGNKA
Sbjct: 129 KELQKHGSPDIVMALVGNKA 148
>gi|84626822|gb|ABC59814.1| small GTPase Rab5b [Nicotiana tabacum]
Length = 200
Score = 255 bits (651), Expect = 3e-066
Identities = 127/140 (90%), Positives = 132/140 (94%)
Frame = -3
Query: 422 DRGSGRLVGPNVENGGAADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGAS 243
DR SGR G N +NGGA D KNL+VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGAS
Sbjct: 9 DRNSGRAAGLNPDNGGAVDPKNLKVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGAS 68
Query: 242 FLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPESFNKAQYWV 63
FLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAV+VYDITSPESF KAQYWV
Sbjct: 69 FLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITSPESFAKAQYWV 128
Query: 62 KELQKHGTPDIVLALVGNKA 3
KELQKHG+PDIV+ALVGNKA
Sbjct: 129 KELQKHGSPDIVMALVGNKA 148
>gi|118488888|gb|ABK96253.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 201
Score = 255 bits (649), Expect = 4e-066
Identities = 128/141 (90%), Positives = 135/141 (95%), Gaps = 1/141 (0%)
Frame = -3
Query: 422 DRGSGRLVG-PNVENGGAADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGA 246
DR +GRL G N E+GG ADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVT+GA
Sbjct: 9 DRSTGRLGGLNNSESGGVADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTIGA 68
Query: 245 SFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPESFNKAQYW 66
SFLSQTIALQDSTT+KFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPE+FNKAQYW
Sbjct: 69 SFLSQTIALQDSTTIKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPETFNKAQYW 128
Query: 65 VKELQKHGTPDIVLALVGNKA 3
VKELQKHG+PDIV+ALVGNKA
Sbjct: 129 VKELQKHGSPDIVMALVGNKA 149
>gi|1370180|emb|CAA98167.1| RAB5B [Lotus japonicus]
Length = 200
Score = 250 bits (636), Expect = 1e-064
Identities = 127/140 (90%), Positives = 129/140 (92%)
Frame = -3
Query: 422 DRGSGRLVGPNVENGGAADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGAS 243
DR S N ENGG DAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGAS
Sbjct: 9 DRDSRPFGRDNPENGGGQDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGAS 68
Query: 242 FLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPESFNKAQYWV 63
FLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPESF+KAQYWV
Sbjct: 69 FLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPESFSKAQYWV 128
Query: 62 KELQKHGTPDIVLALVGNKA 3
KELQKHG PDIV+ALVGNKA
Sbjct: 129 KELQKHGNPDIVMALVGNKA 148
>gi|18410144|ref|NP_567008.1| ARA6; GTP binding [Arabidopsis thaliana]
Length = 202
Score = 244 bits (621), Expect = 8e-063
Identities = 126/141 (89%), Positives = 129/141 (91%), Gaps = 1/141 (0%)
Frame = -3
Query: 422 DRGSGRLVG-PNVENGGAADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGA 246
DR SG L G N EN ADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFD TSKVTVGA
Sbjct: 9 DRNSGTLSGLSNSENAVPADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGA 68
Query: 245 SFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPESFNKAQYW 66
SFLSQTIALQDSTTVKFEIWDTAGQERY+ALAPLYYRGA VAVIVYDITSPESF KAQYW
Sbjct: 69 SFLSQTIALQDSTTVKFEIWDTAGQERYSALAPLYYRGAGVAVIVYDITSPESFKKAQYW 128
Query: 65 VKELQKHGTPDIVLALVGNKA 3
VKELQKHG+PDIV+ALVGNKA
Sbjct: 129 VKELQKHGSPDIVMALVGNKA 149
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 463,804,259,611
Number of Sequences: 7387702
Number of Extensions: 463804259611
Number of Successful Extensions: 251317205
Number of sequences better than 0.0: 0
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