BLASTX 7.6.2
Query= RU22733 /QuerySize=546
(545 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|170058994|ref|XP_001865168.1| histone 1 [Culex quinquefasciatus] 210 6e-053
gi|125605800|gb|EAZ44836.1| hypothetical protein OsJ_028319 [Ory... 208 2e-052
gi|115440899|ref|NP_001044729.1| Os01g0835900 [Oryza sativa (jap... 207 5e-052
gi|195617694|gb|ACG30677.1| unknown [Zea mays] 207 5e-052
gi|15226944|ref|NP_180441.1| HIS4 (Histone H4) [Arabidopsis thal... 206 8e-052
>gi|170058994|ref|XP_001865168.1| histone 1 [Culex quinquefasciatus]
Length = 117
Score = 210 bits (533), Expect = 6e-053
Identities = 105/115 (91%), Positives = 108/115 (93%)
Frame = +2
Query: 32 HQNQNQSFSPVKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRIS 211
H N S S KM+GRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRIS
Sbjct: 3 HLNFKTSRSSTKMTGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRIS 62
Query: 212 GLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 376
GLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 GLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 117
>gi|125605800|gb|EAZ44836.1| hypothetical protein OsJ_028319 [Oryza sativa
(japonica cultivar-group)]
Length = 285
Score = 208 bits (528), Expect = 2e-052
Identities = 106/122 (86%), Positives = 109/122 (89%)
Frame = +2
Query: 11 SSQLSHPHQNQNQSFSPVKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARR 190
S S +++Q MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARR
Sbjct: 164 SQYRSTKNRHQKSPIPSSSMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARR 223
Query: 191 GGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 370
GGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF
Sbjct: 224 GGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 283
Query: 371 GG 376
GG
Sbjct: 284 GG 285
>gi|115440899|ref|NP_001044729.1| Os01g0835900 [Oryza sativa (japonica
cultivar-group)]
Length = 124
Score = 207 bits (525), Expect = 5e-052
Identities = 104/107 (97%)
Frame = +2
Query: 56 SPVKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR 235
S MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR
Sbjct: 18 SAAAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR 77
Query: 236 GVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 376
GVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 78 GVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 124
>gi|195617694|gb|ACG30677.1| unknown [Zea mays]
Length = 149
Score = 207 bits (525), Expect = 5e-052
Identities = 104/110 (94%), Positives = 107/110 (97%)
Frame = +2
Query: 68 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 247
MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
Query: 248 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG*YGDSTI 397
IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG G +++
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGGQAGRASL 110
>gi|15226944|ref|NP_180441.1| HIS4 (Histone H4) [Arabidopsis thaliana]
Length = 103
Score = 206 bits (523), Expect = 8e-052
Identities = 103/103 (100%)
Frame = +2
Query: 68 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 247
MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
Query: 248 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 376
IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 470,955,923,008
Number of Sequences: 7387702
Number of Extensions: 470955923008
Number of Successful Extensions: 259291540
Number of sequences better than 0.0: 0
|