BLASTX 7.6.2
Query= RU22763 /QuerySize=585
(584 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|7387726|sp|O22582|H2B_GOSHI Histone H2B 265 2e-069
gi|108860772|sp|Q1S9I9|H2B1_MEDTR Probable histone H2B.1 263 5e-069
gi|108860773|sp|Q1SWQ1|H2B2_MEDTR Probable histone H2B.2 260 8e-068
gi|15226943|ref|NP_180440.1| histone H2B, putative [Arabidopsis ... 255 2e-066
gi|158053020|dbj|BAF81889.1| histone H2B [Nicotiana tabacum] 245 3e-063
>gi|7387726|sp|O22582|H2B_GOSHI Histone H2B
Length = 147
Score = 265 bits (675), Expect = 2e-069
Identities = 138/147 (93%), Positives = 141/147 (95%), Gaps = 1/147 (0%)
Frame = +3
Query: 75 MAPKAEKKPAEKKPA-EKAPAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRNKKSVETY 251
MAPKAEKKPAEKKPA EK AEKAPAEKKPKAGKKLPKE GAAAGDKKKKR KKSVETY
Sbjct: 1 MAPKAEKKPAEKKPAEEKKAVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRVKKSVETY 60
Query: 252 KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTA 431
KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTA
Sbjct: 61 KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTA 120
Query: 432 VRLVLPGELAKHAVSEGTKAVTKFTST 512
VRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct: 121 VRLVLPGELAKHAVSEGTKAVTKFTSS 147
>gi|108860772|sp|Q1S9I9|H2B1_MEDTR Probable histone H2B.1
Length = 148
Score = 263 bits (672), Expect = 5e-069
Identities = 136/148 (91%), Positives = 142/148 (95%), Gaps = 2/148 (1%)
Frame = +3
Query: 75 MAPKAEKKPAEKKPAE--KAPAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRNKKSVET 248
MAPK EKKPAEKKPAE K+ AEKAPAEKKPKAGKKLPKE G+AAG+KKKKR+KKSVET
Sbjct: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGEKKKKRSKKSVET 60
Query: 249 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT 428
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQT
Sbjct: 61 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120
Query: 429 AVRLVLPGELAKHAVSEGTKAVTKFTST 512
AVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
>gi|108860773|sp|Q1SWQ1|H2B2_MEDTR Probable histone H2B.2
Length = 148
Score = 260 bits (662), Expect = 8e-068
Identities = 134/148 (90%), Positives = 140/148 (94%), Gaps = 2/148 (1%)
Frame = +3
Query: 75 MAPKAEKKPAEKKPAE--KAPAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRNKKSVET 248
MAPK EKKPAEKKPAE K+ AEKAPAEKKPKAGKKLPKE G+AAG+KKKKR+KKSVET
Sbjct: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGEKKKKRSKKSVET 60
Query: 249 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT 428
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKL QESS+LARYNKKPTITSREIQT
Sbjct: 61 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLTQESSRLARYNKKPTITSREIQT 120
Query: 429 AVRLVLPGELAKHAVSEGTKAVTKFTST 512
AVRLVLPGELAKH VSEGTKAVTKFTS+
Sbjct: 121 AVRLVLPGELAKHDVSEGTKAVTKFTSS 148
>gi|15226943|ref|NP_180440.1| histone H2B, putative [Arabidopsis thaliana]
Length = 151
Score = 255 bits (650), Expect = 2e-066
Identities = 135/151 (89%), Positives = 138/151 (91%), Gaps = 5/151 (3%)
Frame = +3
Query: 75 MAPKAEKKPAEKKPAEKAPA-----AEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRNKKS 239
MAPKA KKPAEKKPAEKAPA AEKAPAEKKPKAGKKLPKEA +KKKKR KKS
Sbjct: 1 MAPKAGKKPAEKKPAEKAPAEEEKVAEKAPAEKKPKAGKKLPKEAVTGGVEKKKKRVKKS 60
Query: 240 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSRE 419
ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSRE
Sbjct: 61 TETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120
Query: 420 IQTAVRLVLPGELAKHAVSEGTKAVTKFTST 512
IQTAVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 151
>gi|158053020|dbj|BAF81889.1| histone H2B [Nicotiana tabacum]
Length = 141
Score = 245 bits (623), Expect = 3e-063
Identities = 125/137 (91%), Positives = 130/137 (94%)
Frame = +3
Query: 102 AEKKPAEKAPAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRNKKSVETYKIYIFKVLKQ 281
AEKKPAEK PA EKAPAEKKPKAGKKLP + GA+ DKKKK+ KKSVETYKIYIFKVLKQ
Sbjct: 5 AEKKPAEKKPAEEKAPAEKKPKAGKKLPAKDGASGADKKKKKAKKSVETYKIYIFKVLKQ 64
Query: 282 VHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELA 461
VHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVLPGELA
Sbjct: 65 VHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELA 124
Query: 462 KHAVSEGTKAVTKFTST 512
KHAVSEGTKAVTKFTS+
Sbjct: 125 KHAVSEGTKAVTKFTSS 141
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 470,955,923,008
Number of Sequences: 7387702
Number of Extensions: 470955923008
Number of Successful Extensions: 259291540
Number of sequences better than 0.0: 0
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