BLASTX 7.6.2
Query= RU22891 /QuerySize=694
(693 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|8698728|gb|AAF78486.1|AC012187_6 Contains weak similarity to ... 143 2e-032
gi|18391437|ref|NP_563914.1| proline-rich family protein [Arabid... 143 2e-032
gi|212526706|ref|XP_002143510.1| actin associated protein Wsp1, ... 81 5e-014
gi|47230261|emb|CAG10675.1| unnamed protein product [Tetraodon n... 80 9e-014
gi|15235668|ref|NP_193070.1| leucine-rich repeat family protein ... 79 4e-013
>gi|8698728|gb|AAF78486.1|AC012187_6 Contains weak similarity to GATA-6
DNA-binding protein from Homo sapiens gb|X95701. ESTs gb|N38392,
gb|AI998367, gb|H36135, gb|Z26200 come from this gene. [Arabidopsis
thaliana]
Length = 198
Score = 143 bits (358), Expect = 2e-032
Identities = 72/130 (55%), Positives = 76/130 (58%), Gaps = 26/130 (20%)
Frame = +2
Query: 47 PQEPYPPPP-----PPPGYPYPQPGPPVSAPP--YEGYPPPPPPPGYPPHGYGPPPPRPP 205
P E YPPP PPPGYP P P +PP +EGYPPP P GY PPP
Sbjct: 76 PPESYPPPGYQSHYPPPGYPSAPPPPGYPSPPSHHEGYPPPQPYGGY-------PPPSSR 128
Query: 206 PYE-GYQGYF-NGGY----------PPPQYQQPCYHDHHHYQAQDDGCVSFLRGCLGTLF 349
PYE GYQGYF GGY PPPQ C+HDHHHYQ D GC SF+RGCL L
Sbjct: 129 PYEGGYQGYFAGGGYPHQHHGPPPPPPPQNYDHCHHDHHHYQDSDSGCFSFIRGCLAALC 188
Query: 350 CCCLLEECCF 379
CCCLLEECCF
Sbjct: 189 CCCLLEECCF 198
>gi|18391437|ref|NP_563914.1| proline-rich family protein [Arabidopsis
thaliana]
Length = 129
Score = 143 bits (358), Expect = 2e-032
Identities = 72/130 (55%), Positives = 76/130 (58%), Gaps = 26/130 (20%)
Frame = +2
Query: 47 PQEPYPPPP-----PPPGYPYPQPGPPVSAPP--YEGYPPPPPPPGYPPHGYGPPPPRPP 205
P E YPPP PPPGYP P P +PP +EGYPPP P GY PPP
Sbjct: 7 PPESYPPPGYQSHYPPPGYPSAPPPPGYPSPPSHHEGYPPPQPYGGY-------PPPSSR 59
Query: 206 PYE-GYQGYF-NGGY----------PPPQYQQPCYHDHHHYQAQDDGCVSFLRGCLGTLF 349
PYE GYQGYF GGY PPPQ C+HDHHHYQ D GC SF+RGCL L
Sbjct: 60 PYEGGYQGYFAGGGYPHQHHGPPPPPPPQNYDHCHHDHHHYQDSDSGCFSFIRGCLAALC 119
Query: 350 CCCLLEECCF 379
CCCLLEECCF
Sbjct: 120 CCCLLEECCF 129
>gi|212526706|ref|XP_002143510.1| actin associated protein Wsp1, putative
[Penicillium marneffei ATCC 18224]
Length = 627
Score = 81 bits (199), Expect = 5e-014
Identities = 37/69 (53%), Gaps = 6/69 (8%)
Frame = +2
Query: 47 PQEPYPPPPPPPGYPYPQPGPPVSAPPYEGYPPPPPPPGYPPHGYGPPPPRPPPYEGYQG 226
P P PPPPPPP P P PP PP G PPPPPPP PP G PPP PPP G
Sbjct: 473 PPPPPPPPPPPPSSGIPPPPPPPPPPPSSGAPPPPPPPPPPPASSGAPPPPPPPPPG--- 529
Query: 227 YFNGGYPPP 253
G PPP
Sbjct: 530 ---GAAPPP 535
>gi|47230261|emb|CAG10675.1| unnamed protein product [Tetraodon nigroviridis]
Length = 579
Score = 80 bits (197), Expect = 9e-014
Identities = 39/76 (51%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +2
Query: 44 GPQEPYPPPPPPPGYPYPQPGPPVSAPPYEGYPPPPPPPGYPPHGYGPPPPRPPPYEGYQ 223
G P PPPPPPPG+ P P PP P G PPPPPPP P G PPPP PPP G
Sbjct: 357 GAPPPPPPPPPPPGFLGPPPPPPPPLPGNTGAPPPPPPPPPLPGGGPPPPPPPPPPPGLP 416
Query: 224 GYFNGGYPPPQYQQPC 271
G G PPP C
Sbjct: 417 G---AGPPPPPPPPGC 429
>gi|15235668|ref|NP_193070.1| leucine-rich repeat family protein / extensin
family protein [Arabidopsis thaliana]
Length = 760
Score = 79 bits (192), Expect = 4e-013
Identities = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 56 PYPPPPPPPGYPYPQPGPPVSAPPYEGYPPPPPPPGYPPHGYGPPPPRPPPYEGYQGYFN 235
P PPPPPPP Y P P PP PP PPPPPPP PP Y PPPP PPP Y
Sbjct: 439 PPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPP-PPPPVYSP 497
Query: 236 GGYPPPQYQQPCY 274
PPP P Y
Sbjct: 498 PPPPPPPPPPPVY 510
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 477,735,085,954
Number of Sequences: 7387702
Number of Extensions: 477735085954
Number of Successful Extensions: 266515522
Number of sequences better than 0.0: 0
|