BLASTX 7.6.2
Query= RU23008 /QuerySize=862
(861 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157341390|emb|CAO49297.1| unnamed protein product [Vitis vini... 210 2e-052
gi|147815441|emb|CAN74990.1| hypothetical protein [Vitis vinifera] 194 1e-047
gi|148878533|dbj|BAF64424.1| nuclear matrix constituent protein ... 114 9e-024
gi|2190187|dbj|BAA20407.1| nuclear matrix constituent protein 1 ... 113 2e-023
gi|147815739|emb|CAN74873.1| hypothetical protein [Vitis vinifera] 80 2e-013
>gi|157341390|emb|CAO49297.1| unnamed protein product [Vitis vinifera]
Length = 1167
Score = 210 bits (532), Expect = 2e-052
Identities = 137/279 (49%), Positives = 167/279 (59%), Gaps = 8/279 (2%)
Frame = +3
Query: 9 EVDAGQYPSADEH--ISEAPNVLKDSQPTNLKGGRQKPRGRGRATVNRTRSVKAVVKDAK 182
EV+AGQ S DE S+A + + SQ ++LKG R+KP R + ++RTRSVKAVV+DAK
Sbjct: 883 EVEAGQDLSIDESNIDSKALELQQHSQHSDLKGARRKPGKRSKQRIHRTRSVKAVVRDAK 942
Query: 183 AILGEAFETNDGQYQNGTAEDSANMYTESHDDSSLAGKRTTRNGRKRGRAQTSQVAVSEH 362
AILGE+ E ++ ++ NG EDSA+M ES +SS A K T RNGRKR RA TSQ VSE
Sbjct: 943 AILGESLELSENEHPNGNPEDSAHMNDESRGESSFADKGTPRNGRKRQRAYTSQTMVSEQ 1002
Query: 363 GGDDSE-RSDSVMTGQRKKRREKVPAAEQPPNERRYNLRRSKAGGKVAAAKVSHDLVKQN 539
GDDSE RSDSVM ++ KRR+KVP A Q + RYNLRR K VAAAK S +L K+
Sbjct: 1003 DGDDSEGRSDSVMARRQGKRRQKVPPAVQTLGQERYNLRRPKTTVTVAAAKSSTNLHKRK 1062
Query: 540 E-EVD--SARDTEAEILYSKAAPATSTGFAGENGGSTHFVRCGTLADALAGGADGVKNSA 710
E E D A T EI AAPATS G ENGGSTH ++ D AD K
Sbjct: 1063 ETETDGSGAGGTGEEIPDCNAAPATSVGLISENGGSTHVLQLEAAEDTQDDNADVTKELV 1122
Query: 711 ENMAVSEGV--VPQKGVRSMLMESTGVNPVGRMPISLKM 821
ENMA+SE V P +G E G + I K+
Sbjct: 1123 ENMALSEEVNETPDEGPMEYNDEDEEYEHPGEVSIGKKL 1161
>gi|147815441|emb|CAN74990.1| hypothetical protein [Vitis vinifera]
Length = 1140
Score = 194 bits (491), Expect = 1e-047
Identities = 121/224 (54%), Positives = 147/224 (65%), Gaps = 6/224 (2%)
Frame = +3
Query: 9 EVDAGQYPSADEH--ISEAPNVLKDSQPTNLKGGRQKPRGRGRATVNRTRSVKAVVKDAK 182
EV+AGQ S DE S+A + + SQ ++LKG R+KP R + ++RTRSVKAVV+DAK
Sbjct: 876 EVEAGQDLSIDESNIDSKALELQQHSQHSDLKGARRKPGKRSKQRIHRTRSVKAVVRDAK 935
Query: 183 AILGEAFETNDGQYQNGTAEDSANMYTESHDDSSLAGKRTTRNGRKRGRAQTSQVAVSEH 362
AILGE+ E ++ ++ NG EDSA+M ES +SS A K T RNGRKR RA TSQ VSE
Sbjct: 936 AILGESLELSENEHPNGNPEDSAHMNDESRGESSFADKGTPRNGRKRQRAYTSQTMVSEQ 995
Query: 363 GGDDSE-RSDSVMTGQRKKRREKVPAAEQPPNERRYNLRRSKAGGKVAAAKVSHDLVKQN 539
GDDSE RSDSVM ++ KRR+KVP A Q + RYNLRR K VAAAK S +L K+
Sbjct: 996 DGDDSEGRSDSVMARRQGKRRQKVPPAVQTLGQERYNLRRPKNTVTVAAAKSSTNLHKRK 1055
Query: 540 E-EVD--SARDTEAEILYSKAAPATSTGFAGENGGSTHFVRCGT 662
E E D A T EI AAPATS G ENGGSTH ++ T
Sbjct: 1056 ETETDGSGAGGTGEEIPDCNAAPATSVGLISENGGSTHVLQVET 1099
>gi|148878533|dbj|BAF64424.1| nuclear matrix constituent protein 1-like
[Petroselinum crispum]
Length = 1119
Score = 114 bits (285), Expect = 9e-024
Identities = 73/171 (42%), Positives = 92/171 (53%), Gaps = 6/171 (3%)
Frame = +3
Query: 69 LKDSQPTNLKGGRQKPRGRGRATVNRTRSVKAVVKDAKAILGEAFETNDGQYQNGTAEDS 248
++DSQ ++++ G +KP R + V R RS K V ++AK +L + E N+ ++ NG A
Sbjct: 848 VEDSQQSDVRAGNRKPGKRAKGRVRRKRSAKEVAEEAKTVLADPIELNENEHSNGLASAY 907
Query: 249 ANMYTESHDDSSLAGKRTTRNGRKRGRAQTSQVAVSEHGGDDSERSDSVMTGQRKKRREK 428
N ES DSSL GKR TRN RKR +Q SQ A E G D SDSV G R+KRR K
Sbjct: 908 TN---ESRGDSSLVGKR-TRNSRKRNPSQPSQSAAGEVGADSEGHSDSVTAGGRQKRRRK 963
Query: 429 VPAAEQPPNERRYNLRRSKAGGKVAAAKVSHDLVKQNE-EVDSARDTEAEI 578
V A Q P RYNLRR K + A D K E E+D EI
Sbjct: 964 VVPAVQAPT-GRYNLRRHKTAAPLVANGALSDPNKGKEKEIDDGGGIGEEI 1013
>gi|2190187|dbj|BAA20407.1| nuclear matrix constituent protein 1 [Daucus
carota]
Length = 1119
Score = 113 bits (282), Expect = 2e-023
Identities = 72/171 (42%), Positives = 92/171 (53%), Gaps = 6/171 (3%)
Frame = +3
Query: 69 LKDSQPTNLKGGRQKPRGRGRATVNRTRSVKAVVKDAKAILGEAFETNDGQYQNGTAEDS 248
++DSQ ++++ G +KP R + V R RS K V ++AK +L + E N+ ++ NG A
Sbjct: 848 VEDSQQSDVRAGNRKPGKRAKGRVRRKRSAKEVAEEAKTVLADPIELNENEHSNGLASAY 907
Query: 249 ANMYTESHDDSSLAGKRTTRNGRKRGRAQTSQVAVSEHGGDDSERSDSVMTGQRKKRREK 428
N ES DSSL GKR TRN RKR +Q SQ A + G D SDSV G R+KRR K
Sbjct: 908 TN---ESRGDSSLVGKR-TRNSRKRNPSQPSQSAAGDVGADSEGHSDSVTAGGRQKRRRK 963
Query: 429 VPAAEQPPNERRYNLRRSKAGGKVAAAKVSHDLVKQNE-EVDSARDTEAEI 578
V A Q P RYNLRR K + A D K E E+D EI
Sbjct: 964 VVPAVQAPT-GRYNLRRHKTAAPLVANGALSDPNKGKEKEIDDGGGIGEEI 1013
>gi|147815739|emb|CAN74873.1| hypothetical protein [Vitis vinifera]
Length = 1234
Score = 80 bits (196), Expect = 2e-013
Identities = 61/152 (40%), Positives = 80/152 (52%), Gaps = 8/152 (5%)
Frame = +3
Query: 228 NGTAEDSANMYT--ESHDDSSLAGKRTTRNGRKRGRAQTSQVAVSEHGGDDSE-RSDSVM 398
NG + + YT E ++S A K + RKR RA +S++ SE DSE RSDSV
Sbjct: 996 NGDERPNDSTYTNEEGERETSHAEKAASTITRKRQRAPSSRITESEQDAADSEGRSDSVT 1055
Query: 399 TGQRKKRREKVPAAEQPPNERRYNLRRSKAGGKVAAAKVSHDLVKQNEEVDSARDTEAEI 578
G R KRR+ V Q P E+RYNLRR K G VA A+ S +L K++E+ D
Sbjct: 1056 AGGRGKRRQTVAPVVQTPGEKRYNLRRHKTAGTVATAQASANLPKRDEKGGDGGDDNT-- 1113
Query: 579 LYSKAAP--ATSTGFA-GENGGSTHFVRCGTL 665
L +KA P A+S A +N +T V TL
Sbjct: 1114 LQTKANPKAASSPSLADSDNPKTTPLVHVTTL 1145
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 484,389,465,798
Number of Sequences: 7387702
Number of Extensions: 484389465798
Number of Successful Extensions: 274197182
Number of sequences better than 0.0: 0
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