BLASTX 7.6.2
Query= RU23616 /QuerySize=879
(878 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|186511008|ref|NP_190902.2| transcription factor [Arabidopsis ... 260 1e-067
gi|6729485|emb|CAB67641.1| transcription factor NF-Y, CCAAT-bind... 250 1e-064
gi|81074849|gb|ABB55377.1| transcription factor NF-Y CCAAT-bindi... 231 9e-059
gi|73919925|sp|Q60EQ4|NFYB3_ORYSJ Nuclear transcription factor Y... 213 1e-053
gi|125552635|gb|EAY98344.1| hypothetical protein OsI_019577 [Ory... 213 1e-053
>gi|186511008|ref|NP_190902.2| transcription factor [Arabidopsis thaliana]
Length = 176
Score = 260 bits (663), Expect = 1e-067
Identities = 132/166 (79%), Positives = 145/166 (87%), Gaps = 5/166 (3%)
Frame = -2
Query: 826 GGHDSGGEHSPRS-NVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISF 650
G H+SGG+ SPRS NVREQDR+LPIANISRIMK+ LP NGKIAKDAKET+QECVSEFISF
Sbjct: 12 GSHESGGDQSPRSLNVREQDRFLPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFISF 71
Query: 649 ITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLAKYREMEGDTKGSGKGGE 470
+TSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYL +YREMEGDTKGSGKGGE
Sbjct: 72 VTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLMRYREMEGDTKGSGKGGE 131
Query: 469 SSSKKEVQPSSIAQIS---HQGSFSQGASYSNSQTQQMMVPMQGSE 341
SS+K++ QPS ++Q S QGSFSQG Y NSQ MMV M G+E
Sbjct: 132 SSAKRDGQPSQVSQFSQVPQQGSFSQG-PYGNSQGSNMMVQMPGTE 176
>gi|6729485|emb|CAB67641.1| transcription factor NF-Y, CCAAT-binding-like
protein [Arabidopsis thaliana]
Length = 228
Score = 250 bits (637), Expect = 1e-064
Identities = 126/155 (81%), Positives = 139/155 (89%), Gaps = 5/155 (3%)
Frame = -2
Query: 826 GGHDSGGEHSPRS-NVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISF 650
G H+SGG+ SPRS NVREQDR+LPIANISRIMK+ LP NGKIAKDAKET+QECVSEFISF
Sbjct: 12 GSHESGGDQSPRSLNVREQDRFLPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFISF 71
Query: 649 ITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLAKYREMEGDTKGSGKGGE 470
+TSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYL +YREMEGDTKGSGKGGE
Sbjct: 72 VTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLMRYREMEGDTKGSGKGGE 131
Query: 469 SSSKKEVQPSSIAQIS---HQGSFSQGASYSNSQT 374
SS+K++ QPS ++Q S QGSFSQG Y NSQ+
Sbjct: 132 SSAKRDGQPSQVSQFSQVPQQGSFSQG-PYGNSQS 165
>gi|81074849|gb|ABB55377.1| transcription factor NF-Y CCAAT-binding-like
protein-like [Solanum tuberosum]
Length = 165
Score = 231 bits (587), Expect = 9e-059
Identities = 114/153 (74%), Positives = 132/153 (86%), Gaps = 3/153 (1%)
Frame = -2
Query: 826 GGHDSGGEHSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFI 647
G H+SGG+ SP+SN+REQDRYLPIANI RIMKKALPANGKIAKD+K+TVQECVSEFISFI
Sbjct: 12 GSHESGGDPSPQSNLREQDRYLPIANIGRIMKKALPANGKIAKDSKDTVQECVSEFISFI 71
Query: 646 TSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLAKYREMEGDTKGSGKGGES 467
TSEASDKCQ+EKRKTINGDDLL A+ATLGFEDYI+PLKVYL +YREMEGD KGS + G++
Sbjct: 72 TSEASDKCQKEKRKTINGDDLLSALATLGFEDYIEPLKVYLTRYREMEGDAKGSARVGDA 131
Query: 466 SSKKEV---QPSSIAQISHQGSFSQGASYSNSQ 377
S +K+V Q S Q ++GSF+QG Y NSQ
Sbjct: 132 SVRKDVVGSQLGSNTQFMYEGSFAQGLDYGNSQ 164
>gi|73919925|sp|Q60EQ4|NFYB3_ORYSJ Nuclear transcription factor Y subunit B-3
(OsNF-YB-3) (Transcriptional activator HAP3B)
Length = 185
Score = 213 bits (542), Expect = 1e-053
Identities = 110/156 (70%), Positives = 121/156 (77%), Gaps = 6/156 (3%)
Frame = -2
Query: 826 GGHDSGGEHSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFI 647
GG GG VREQDR+LPIANISRIMKKA+PANGKIAKDAKETVQECVSEFISFI
Sbjct: 22 GGGGGGGGGGGGGGVREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFI 81
Query: 646 TSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLAKYREMEGDTKGSGKGGES 467
TSEASDKCQREKRKTINGDDLLWAMATLGFEDYI+PLKVYL KYREMEGD+K + K G+
Sbjct: 82 TSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGDSKLTAKAGDG 141
Query: 466 SSKKEV------QPSSIAQISHQGSFSQGASYSNSQ 377
S KK+V SS + Q +++QG Y Q
Sbjct: 142 SVKKDVLGSHGGSSSSAQGMGQQAAYNQGMGYMQPQ 177
>gi|125552635|gb|EAY98344.1| hypothetical protein OsI_019577 [Oryza sativa
(indica cultivar-group)]
Length = 188
Score = 213 bits (542), Expect = 1e-053
Identities = 110/156 (70%), Positives = 121/156 (77%), Gaps = 6/156 (3%)
Frame = -2
Query: 826 GGHDSGGEHSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFI 647
GG GG VREQDR+LPIANISRIMKKA+PANGKIAKDAKETVQECVSEFISFI
Sbjct: 22 GGGGGGGGGGGGGGVREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFI 81
Query: 646 TSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLAKYREMEGDTKGSGKGGES 467
TSEASDKCQREKRKTINGDDLLWAMATLGFEDYI+PLKVYL KYREMEGD+K + K G+
Sbjct: 82 TSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGDSKLTAKAGDG 141
Query: 466 SSKKEV------QPSSIAQISHQGSFSQGASYSNSQ 377
S KK+V SS + Q +++QG Y Q
Sbjct: 142 SVKKDVLGSHGGSSSSAQGMGQQAAYNQGMGYMQPQ 177
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 497,742,244,830
Number of Sequences: 7387702
Number of Extensions: 497742244830
Number of Successful Extensions: 289091665
Number of sequences better than 0.0: 0
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