BLASTX 7.6.2
Query= RU23674 /QuerySize=1724
(1723 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157335152|emb|CAO60982.1| unnamed protein product [Vitis vini... 889 1e-256
gi|166343831|gb|ABY86658.1| beta-tubulin 11 [Gossypium hirsutum] 882 3e-254
gi|54036489|sp|Q6VAF6.1|TBB6_GOSHI Tubulin beta-6 chain (Beta-6-... 881 6e-254
gi|153799897|gb|ABS50667.1| beta-tubulin [Eucalyptus grandis] 876 1e-252
gi|3915083|sp|Q39445.1|TBB_CICAR Tubulin beta chain (Beta-tubulin) 869 1e-250
>gi|157335152|emb|CAO60982.1| unnamed protein product [Vitis vinifera]
Length = 448
Score = 889 bits (2297), Expect = 1e-256
Identities = 432/448 (96%), Positives = 440/448 (98%), Gaps = 1/448 (0%)
Frame = -2
Query: 1596 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGRYKGDGSSDLQLERINVYYNEASGGR 1417
MREILH+QGGQCGNQIGSKFWEVICDEHGVDPTGRY GDGSSDLQLERINVYYNEASGGR
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDGSSDLQLERINVYYNEASGGR 60
Query: 1416 YVPRAVLMDLEPGTMDSIRSGPFGQIFRHDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 1237
YVPRAVLMDLEPGTMDSIRSGP+GQIFR DNFVFGQSGAGNNWAKGHYTEGAELID+VLD
Sbjct: 61 YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 120
Query: 1236 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 1057
VVRKEAENCDC+QGFQVCHSLGGGTGSGMGTLLISK+REEYPDRMMLTFSVFPSPKVSDT
Sbjct: 121 VVRKEAENCDCMQGFQVCHSLGGGTGSGMGTLLISKMREEYPDRMMLTFSVFPSPKVSDT 180
Query: 1056 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTC 877
VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTC
Sbjct: 181 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTC 240
Query: 876 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKN 697
CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKN
Sbjct: 241 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKN 300
Query: 696 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPHNVKSSVCDIPP 517
MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIP+NVKSSVCDIPP
Sbjct: 301 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 360
Query: 516 LGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 337
GLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL
Sbjct: 361 RGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 420
Query: 336 VAEYQQYQDATVEDEGEYEEDGVEGEYE 253
V+EYQQYQDAT +DEGEYEE G E YE
Sbjct: 421 VSEYQQYQDATADDEGEYEE-GPEENYE 447
>gi|166343831|gb|ABY86658.1| beta-tubulin 11 [Gossypium hirsutum]
Length = 450
Score = 882 bits (2277), Expect = 3e-254
Identities = 425/449 (94%), Positives = 441/449 (98%), Gaps = 1/449 (0%)
Frame = -2
Query: 1596 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGRYKGDGSSDLQLERINVYYNEASGGR 1417
MREILH+QGGQCGNQIGSKFWEVICDEHGVDPTG+Y GDGSSD+QLERI+VYYNEASGGR
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGKYSGDGSSDIQLERIDVYYNEASGGR 60
Query: 1416 YVPRAVLMDLEPGTMDSIRSGPFGQIFRHDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 1237
YVPRAVLMDLEPGTMDSIRSGP GQIFR DNFVFGQSGAGNNWAKGHYTEGAELID+VLD
Sbjct: 61 YVPRAVLMDLEPGTMDSIRSGPIGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 120
Query: 1236 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 1057
VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMM+TFSVFPSPKVSDT
Sbjct: 121 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDT 180
Query: 1056 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTC 877
VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPSFGDLNHLISATMSGVTC
Sbjct: 181 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 240
Query: 876 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKN 697
CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY+SLTVPELTQQMWDAKN
Sbjct: 241 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYVSLTVPELTQQMWDAKN 300
Query: 696 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPHNVKSSVCDIPP 517
MMCAADPRHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIP+NVKSSVCDIPP
Sbjct: 301 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSVCDIPP 360
Query: 516 LGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 337
GLKM+STF+GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEM+FTEAESNMNDL
Sbjct: 361 RGLKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMDFTEAESNMNDL 420
Query: 336 VAEYQQYQDATVEDEGEYE-EDGVEGEYE 253
VAEYQQYQDATVEDE EYE E+G++ YE
Sbjct: 421 VAEYQQYQDATVEDEEEYEGEEGLDENYE 449
>gi|54036489|sp|Q6VAF6.1|TBB6_GOSHI Tubulin beta-6 chain (Beta-6-tubulin)
Length = 450
Score = 881 bits (2274), Expect = 6e-254
Identities = 425/449 (94%), Positives = 440/449 (97%), Gaps = 1/449 (0%)
Frame = -2
Query: 1596 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGRYKGDGSSDLQLERINVYYNEASGGR 1417
MREILH+QGGQCGNQIGSKFWEVICDEHGVDPTG+Y GDGSSD+QLERI+VYYNEASGGR
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGKYNGDGSSDIQLERIDVYYNEASGGR 60
Query: 1416 YVPRAVLMDLEPGTMDSIRSGPFGQIFRHDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 1237
YVPRAVLMDLEPGTMDSIRSGP GQIFR DNFVFGQSGAGNNWAKGHYTEGAELID+VLD
Sbjct: 61 YVPRAVLMDLEPGTMDSIRSGPIGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 120
Query: 1236 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 1057
VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMM+TFSVFPSPKVSDT
Sbjct: 121 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDT 180
Query: 1056 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTC 877
VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPSFGDLNHLISATMSGVTC
Sbjct: 181 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 240
Query: 876 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKN 697
CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY+SLTVPELTQQMWDAKN
Sbjct: 241 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYVSLTVPELTQQMWDAKN 300
Query: 696 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPHNVKSSVCDIPP 517
MMCAADPRHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIP+NVKSSVCDIPP
Sbjct: 301 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSVCDIPP 360
Query: 516 LGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 337
GLK +STF+GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL
Sbjct: 361 RGLKTSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 420
Query: 336 VAEYQQYQDATVEDEGEYE-EDGVEGEYE 253
VAEYQQYQDATVEDE EYE E+G++ YE
Sbjct: 421 VAEYQQYQDATVEDEEEYEGEEGLDENYE 449
>gi|153799897|gb|ABS50667.1| beta-tubulin [Eucalyptus grandis]
Length = 444
Score = 876 bits (2263), Expect = 1e-252
Identities = 424/437 (97%), Positives = 431/437 (98%)
Frame = -2
Query: 1587 ILHIQGGQCGNQIGSKFWEVICDEHGVDPTGRYKGDGSSDLQLERINVYYNEASGGRYVP 1408
ILHIQGGQCGNQIGSKFWEVICDEHG+DPTG++ GD SSDLQLERINVYYNEASGGRYVP
Sbjct: 1 ILHIQGGQCGNQIGSKFWEVICDEHGIDPTGKFTGDASSDLQLERINVYYNEASGGRYVP 60
Query: 1407 RAVLMDLEPGTMDSIRSGPFGQIFRHDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVR 1228
RAVLMDLEPGTMDSIRSGPFGQIFR DNFVFGQSGAGNNWAKGHYTEGAELID+VLDVVR
Sbjct: 61 RAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVR 120
Query: 1227 KEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVE 1048
KEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVE
Sbjct: 121 KEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVE 180
Query: 1047 PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLR 868
PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLR
Sbjct: 181 PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLR 240
Query: 867 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKNMMC 688
FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWD+KNMMC
Sbjct: 241 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDSKNMMC 300
Query: 687 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPHNVKSSVCDIPPLGL 508
AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIP+NVKSSVCDIPP GL
Sbjct: 301 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGL 360
Query: 507 KMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAE 328
KMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAE
Sbjct: 361 KMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAE 420
Query: 327 YQQYQDATVEDEGEYEE 277
YQQYQDAT +DE EYEE
Sbjct: 421 YQQYQDATADDEAEYEE 437
>gi|3915083|sp|Q39445.1|TBB_CICAR Tubulin beta chain (Beta-tubulin)
Length = 449
Score = 869 bits (2245), Expect = 1e-250
Identities = 420/449 (93%), Positives = 436/449 (97%), Gaps = 1/449 (0%)
Frame = -2
Query: 1596 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGRYKGDGSSDLQLERINVYYNEASGGR 1417
MREILH+QGGQCGNQIGSKFWEVICDEHG+D TG+Y +G SD QLERINVYYNEASGGR
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGIDQTGKYISEGGSDTQLERINVYYNEASGGR 60
Query: 1416 YVPRAVLMDLEPGTMDSIRSGPFGQIFRHDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 1237
YVPRAVLMDLEPGTM+SIRSGPFG+IFR DNFVFGQSGAGNNWAKGHYTEGAELIDSVLD
Sbjct: 61 YVPRAVLMDLEPGTMESIRSGPFGKIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 120
Query: 1236 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 1057
VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT
Sbjct: 121 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 180
Query: 1056 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTC 877
VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTC
Sbjct: 181 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTC 240
Query: 876 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKN 697
CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY+SLTVPELTQQMWDAKN
Sbjct: 241 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYVSLTVPELTQQMWDAKN 300
Query: 696 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPHNVKSSVCDIPP 517
MMCAADPRHGRYLTASAMFRGKMSTKEVDEQ+INVQNKNSSYFVEWIP+NVKSSVCDIPP
Sbjct: 301 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPP 360
Query: 516 LGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 337
LKM+STF+GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL
Sbjct: 361 KNLKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 420
Query: 336 VAEYQQYQDATVEDEGEYEEDGVEGEYED 250
VAEYQQYQDA E+E EYEE+G E +Y++
Sbjct: 421 VAEYQQYQDAIAEEEDEYEEEG-EEQYDE 448
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 497,742,244,830
Number of Sequences: 7387702
Number of Extensions: 497742244830
Number of Successful Extensions: 289091665
Number of sequences better than 0.0: 0
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