BLASTX 7.6.2
Query= RU23769 /QuerySize=498
(497 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157355096|emb|CAO48469.1| unnamed protein product [Vitis vini... 81 2e-014
gi|147854704|emb|CAN79596.1| hypothetical protein [Vitis vinifera] 80 4e-014
gi|118486397|gb|ABK95038.1| unknown [Populus trichocarpa] 65 1e-009
gi|11994207|dbj|BAB01310.1| unnamed protein product [Arabidopsis... 65 2e-009
gi|15231003|ref|NP_188629.1| zinc finger (C3HC4-type RING finger... 65 2e-009
>gi|157355096|emb|CAO48469.1| unnamed protein product [Vitis vinifera]
Length = 369
Score = 81 bits (199), Expect = 2e-014
Identities = 50/122 (40%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Frame = -2
Query: 481 SNDMSSSGGNSGIAPAQLYFCHECDRTVSLNPSPTSDLNCPICSGGFLEEMETSNPN--- 311
S G G A Q YFC++C+ TVS+ PSPTSD CP C+ GFLEE+E NPN
Sbjct: 7 SGGSGGGGPGGGSAAPQSYFCYQCNLTVSITPSPTSDPLCPHCNDGFLEEVENPNPNPIP 66
Query: 310 -PSPNPFFSFPSDAPPYGSSGFPSFLFSSPA-GPAAGGPGNLGDELSALLGGGAPSSRSS 137
P PNPF F SD P ++G + F AAGG +L + + GA
Sbjct: 67 VPIPNPFLGF-SDLPSLSAAGATATAFPPLVFSTAAGGSIDLQNSVDFPGLFGADPDAFH 125
Query: 136 PF 131
PF
Sbjct: 126 PF 127
>gi|147854704|emb|CAN79596.1| hypothetical protein [Vitis vinifera]
Length = 371
Score = 80 bits (197), Expect = 4e-014
Identities = 49/115 (42%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Frame = -2
Query: 460 GGNSGIAPAQLYFCHECDRTVSLNPSPTSDLNCPICSGGFLEEMETSNPN----PSPNPF 293
G G A Q YFC++C+ TVS+ PSPTSD CP C+ GFLEE+E NPN P PNPF
Sbjct: 16 GPGGGSAAPQSYFCYQCNLTVSITPSPTSDPLCPHCNDGFLEEVENPNPNPIPVPIPNPF 75
Query: 292 FSFPSDAPPYGSSGFPSFLFSSPA-GPAAGGPGNLGDELSALLGGGAPSSRSSPF 131
F SD P ++G + F AAGG +L + + GA PF
Sbjct: 76 LGF-SDLPSLSAAGATATAFPPLVFSTAAGGSIDLQNSVDFPGLFGADPDAFHPF 129
>gi|118486397|gb|ABK95038.1| unknown [Populus trichocarpa]
Length = 345
Score = 65 bits (158), Expect = 1e-009
Identities = 31/56 (55%), Positives = 39/56 (69%)
Frame = -3
Query: 183 NSPPSSVVARLPPARPPFRTPDAFDPFVFLQNYL*TLRANGANVQFVIDNSGGGGG 16
+S S+ A P F+ PD F+PFVFLQNYL T+RA GAN+QFVI+N+ G GG
Sbjct: 79 SSTTSTTATNSSSASPLFQDPDGFNPFVFLQNYLQTMRAGGANIQFVIENNPGMGG 134
>gi|11994207|dbj|BAB01310.1| unnamed protein product [Arabidopsis thaliana]
Length = 386
Score = 65 bits (157), Expect = 2e-009
Identities = 45/127 (35%), Positives = 67/127 (52%), Gaps = 17/127 (13%)
Frame = -2
Query: 472 MSSSGGNSGIAPA-----QLYFCHECDRTVSLNPSPTSDLNCPICSGGFLEEMETSNPNP 308
MSS ++G A A +++FC++C++TV+++ S ++D CPIC+ GFLEE E NPN
Sbjct: 59 MSSGVNSTGSAAAAPEVDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQ 118
Query: 307 S----PNPFFSFPSDAPPYGSSGFPSFLFSSPAGPAAGGPGNLGDELSALLGGGAPSSRS 140
S PN SF A P+ S+ P SS A P+ G + +L G
Sbjct: 119 SLNFNPNSSDSFFPMADPF-STLLPLIFGSSAAAPS-------GMDFMSLFGPSMQPQAR 170
Query: 139 SPFQDPR 119
S Q+P+
Sbjct: 171 STQQNPQ 177
>gi|15231003|ref|NP_188629.1| zinc finger (C3HC4-type RING finger) family
protein [Arabidopsis thaliana]
Length = 328
Score = 65 bits (157), Expect = 2e-009
Identities = 45/127 (35%), Positives = 67/127 (52%), Gaps = 17/127 (13%)
Frame = -2
Query: 472 MSSSGGNSGIAPA-----QLYFCHECDRTVSLNPSPTSDLNCPICSGGFLEEMETSNPNP 308
MSS ++G A A +++FC++C++TV+++ S ++D CPIC+ GFLEE E NPN
Sbjct: 1 MSSGVNSTGSAAAAPEVDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQ 60
Query: 307 S----PNPFFSFPSDAPPYGSSGFPSFLFSSPAGPAAGGPGNLGDELSALLGGGAPSSRS 140
S PN SF A P+ S+ P SS A P+ G + +L G
Sbjct: 61 SLNFNPNSSDSFFPMADPF-STLLPLIFGSSAAAPS-------GMDFMSLFGPSMQPQAR 112
Query: 139 SPFQDPR 119
S Q+P+
Sbjct: 113 STQQNPQ 119
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 497,742,244,830
Number of Sequences: 7387702
Number of Extensions: 497742244830
Number of Successful Extensions: 289091665
Number of sequences better than 0.0: 0
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