BLASTX 7.6.2
Query= RU23850 /QuerySize=295
(294 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|8886929|gb|AAF80615.1|AC069251_8 F2D10.18 [Arabidopsis thaliana] 95 1e-018
gi|18394898|ref|NP_564123.1| HMGB2 (HIGH MOBILITY GROUP B 2); tr... 92 7e-018
gi|79318286|ref|NP_001031074.1| HMGB2 (HIGH MOBILITY GROUP B 2) ... 92 7e-018
gi|145323960|ref|NP_001077569.1| HMGB2 (HIGH MOBILITY GROUP B 2)... 92 7e-018
gi|118488125|gb|ABK95882.1| unknown [Populus trichocarpa] 89 6e-017
>gi|8886929|gb|AAF80615.1|AC069251_8 F2D10.18 [Arabidopsis thaliana]
Length = 662
Score = 95 bits (235), Expect = 1e-018
Identities = 48/78 (61%), Positives = 55/78 (70%)
Frame = -1
Query: 237 LLQTLTLHQPGISMKGGKSHTKKADSKLAVNKKPAKATRASKKAAKDPNKPKRPASAFFV 58
L + + QP MKG KS T+ SKL+V KKPAK K AAKDPNKPKRPASAFFV
Sbjct: 365 LTTIMEMIQPESIMKGAKSKTETRSSKLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFV 424
Query: 57 FMEEFRKQFNKENPKPQS 4
FME+FR+ F KENPK +S
Sbjct: 425 FMEDFRETFKKENPKNKS 442
>gi|18394898|ref|NP_564123.1| HMGB2 (HIGH MOBILITY GROUP B 2); transcription
factor [Arabidopsis thaliana]
Length = 144
Score = 92 bits (228), Expect = 7e-018
Identities = 45/65 (69%), Positives = 50/65 (76%)
Frame = -1
Query: 198 MKGGKSHTKKADSKLAVNKKPAKATRASKKAAKDPNKPKRPASAFFVFMEEFRKQFNKEN 19
MKG KS T+ SKL+V KKPAK K AAKDPNKPKRPASAFFVFME+FR+ F KEN
Sbjct: 1 MKGAKSKTETRSSKLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKEN 60
Query: 18 PKPQS 4
PK +S
Sbjct: 61 PKNKS 65
>gi|79318286|ref|NP_001031074.1| HMGB2 (HIGH MOBILITY GROUP B 2) [Arabidopsis
thaliana]
Length = 142
Score = 92 bits (228), Expect = 7e-018
Identities = 45/65 (69%), Positives = 50/65 (76%)
Frame = -1
Query: 198 MKGGKSHTKKADSKLAVNKKPAKATRASKKAAKDPNKPKRPASAFFVFMEEFRKQFNKEN 19
MKG KS T+ SKL+V KKPAK K AAKDPNKPKRPASAFFVFME+FR+ F KEN
Sbjct: 1 MKGAKSKTETRSSKLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKEN 60
Query: 18 PKPQS 4
PK +S
Sbjct: 61 PKNKS 65
>gi|145323960|ref|NP_001077569.1| HMGB2 (HIGH MOBILITY GROUP B 2) [Arabidopsis
thaliana]
Length = 143
Score = 92 bits (228), Expect = 7e-018
Identities = 45/65 (69%), Positives = 50/65 (76%)
Frame = -1
Query: 198 MKGGKSHTKKADSKLAVNKKPAKATRASKKAAKDPNKPKRPASAFFVFMEEFRKQFNKEN 19
MKG KS T+ SKL+V KKPAK K AAKDPNKPKRPASAFFVFME+FR+ F KEN
Sbjct: 1 MKGAKSKTETRSSKLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKEN 60
Query: 18 PKPQS 4
PK +S
Sbjct: 61 PKNKS 65
>gi|118488125|gb|ABK95882.1| unknown [Populus trichocarpa]
Length = 151
Score = 89 bits (220), Expect = 6e-017
Identities = 45/70 (64%), Positives = 54/70 (77%), Gaps = 5/70 (7%)
Frame = -1
Query: 198 MKGGKSHTKKADSKLAVNKKPAK-----ATRASKKAAKDPNKPKRPASAFFVFMEEFRKQ 34
MKGG+S + +KL+VNKKP K A + S KAAKDPNKPKRPASAFFVFMEEFR+Q
Sbjct: 1 MKGGRSKSDTKSAKLSVNKKPTKGGAAAAAKKSGKAAKDPNKPKRPASAFFVFMEEFREQ 60
Query: 33 FNKENPKPQS 4
+ KE+PK +S
Sbjct: 61 YKKEHPKNKS 70
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 504,755,133,563
Number of Sequences: 7387702
Number of Extensions: 504755133563
Number of Successful Extensions: 299986299
Number of sequences better than 0.0: 0
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