BLASTX 7.6.2
Query= RU23858 /QuerySize=568
(567 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|147774750|emb|CAN65915.1| hypothetical protein [Vitis vinifera] 245 2e-063
gi|169159250|tpe|CAP64324.1| TPA: putative GID1-like gibberellin... 240 6e-062
gi|15240483|ref|NP_198084.1| ATGID1C/GID1C (GA INSENSITIVE DWARF... 236 6e-061
gi|15229905|ref|NP_187163.1| ATGID1A/GID1A (GA INSENSITIVE DWARF... 236 1e-060
gi|169159264|tpe|CAP64331.1| TPA: putative GID1-like gibberellin... 232 2e-059
>gi|147774750|emb|CAN65915.1| hypothetical protein [Vitis vinifera]
Length = 344
Score = 245 bits (623), Expect = 2e-063
Identities = 116/157 (73%), Positives = 136/157 (86%)
Frame = +2
Query: 41 NEVDLTDSKMVVPLNTWVLISNFKLSYNLLRRPDGTFNRHLAEFLDRKVAPNANPVDGVL 220
NEV+L++SK VVPLNTW+LISNFKL+YNLLRRPDGTFNRHLAEFLDRKV NANPV+GV
Sbjct: 5 NEVNLSESKRVVPLNTWILISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVEGVF 64
Query: 221 SFDVIIDKGTSLLTRIYQPASADAPQPNILDFHKPVGVEVLPVIIFFHGGSFAHSSANSG 400
SFDVIID+ TSLL+RIY+PA+ + P+I++ KPV +++PVI+FFHGGSFAHSSANS
Sbjct: 65 SFDVIIDRSTSLLSRIYRPATGEEALPSIMELEKPVTGDIVPVILFFHGGSFAHSSANSA 124
Query: 401 IYDILCRRLVGNCKAVVVSVNYRRAPENRFLCTFKPG 511
IYD LCRRLVG CKAVVVSVNYRRAPEN + C + G
Sbjct: 125 IYDTLCRRLVGICKAVVVSVNYRRAPENPYPCAYDDG 161
>gi|169159250|tpe|CAP64324.1| TPA: putative GID1-like gibberellin receptor
[Medicago truncatula]
Length = 345
Score = 240 bits (611), Expect = 6e-062
Identities = 115/157 (73%), Positives = 130/157 (82%)
Frame = +2
Query: 41 NEVDLTDSKMVVPLNTWVLISNFKLSYNLLRRPDGTFNRHLAEFLDRKVAPNANPVDGVL 220
N+++ DSKMVVPLN WVLISNFKL+YNLLRRPDGTFNR LAEFLDRKV NANPVDGV
Sbjct: 5 NQLNPNDSKMVVPLNMWVLISNFKLAYNLLRRPDGTFNRDLAEFLDRKVPANANPVDGVF 64
Query: 221 SFDVIIDKGTSLLTRIYQPASADAPQPNILDFHKPVGVEVLPVIIFFHGGSFAHSSANSG 400
SFDVI+D+ T+LLTRIY+P + NI+D KP EVLPV++FFHGGSFAHSSANS
Sbjct: 65 SFDVIVDRETNLLTRIYRPVEGEEQHVNIVDLEKPATAEVLPVVMFFHGGSFAHSSANSA 124
Query: 401 IYDILCRRLVGNCKAVVVSVNYRRAPENRFLCTFKPG 511
IYD LCRRLVG C AVVVSVNYRRAPENR+ C ++ G
Sbjct: 125 IYDTLCRRLVGICNAVVVSVNYRRAPENRYPCAYEDG 161
>gi|15240483|ref|NP_198084.1| ATGID1C/GID1C (GA INSENSITIVE DWARF1C); hydrolase
[Arabidopsis thaliana]
Length = 344
Score = 236 bits (602), Expect = 6e-061
Identities = 116/156 (74%), Positives = 131/156 (83%), Gaps = 1/156 (0%)
Frame = +2
Query: 44 EVDLTDSKMVVPLNTWVLISNFKLSYNLLRRPDGTFNRHLAEFLDRKVAPNANPVDGVLS 223
EV+L +SK VVPLNTWVLISNFKL+YNLLRRPDGTFNRHLAEFLDRKV NANPV+GV S
Sbjct: 6 EVNLIESKTVVPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVNGVFS 65
Query: 224 FDVIIDKGTSLLTRIYQPASADAPQPNILDFHKPVGVEVLPVIIFFHGGSFAHSSANSGI 403
FDVIID+ T+LL+R+Y+PA A P+I D PV E++PVI+FFHGGSFAHSSANS I
Sbjct: 66 FDVIIDRQTNLLSRVYRPADA-GTSPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAI 124
Query: 404 YDILCRRLVGNCKAVVVSVNYRRAPENRFLCTFKPG 511
YD LCRRLVG C AVVVSVNYRRAPENR+ C + G
Sbjct: 125 YDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDG 160
>gi|15229905|ref|NP_187163.1| ATGID1A/GID1A (GA INSENSITIVE DWARF1A); hydrolase
[Arabidopsis thaliana]
Length = 345
Score = 236 bits (600), Expect = 1e-060
Identities = 113/158 (71%), Positives = 134/158 (84%), Gaps = 1/158 (0%)
Frame = +2
Query: 41 NEVDLTDSKMVVPLNTWVLISNFKLSYNLLRRPDGTFNRHLAEFLDRKVAPNANPVDGVL 220
+EV+L +S+ VVPLNTWVLISNFK++YN+LRRPDGTFNRHLAE+LDRKV NANPVDGV
Sbjct: 5 DEVNLIESRTVVPLNTWVLISNFKVAYNILRRPDGTFNRHLAEYLDRKVTANANPVDGVF 64
Query: 221 SFDVIIDKGTSLLTRIYQPASADAPQ-PNILDFHKPVGVEVLPVIIFFHGGSFAHSSANS 397
SFDV+ID+ +LL+R+Y+PA AD Q P+ILD KPV +++PVI+FFHGGSFAHSSANS
Sbjct: 65 SFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANS 124
Query: 398 GIYDILCRRLVGNCKAVVVSVNYRRAPENRFLCTFKPG 511
IYD LCRRLVG CK VVVSVNYRRAPEN + C + G
Sbjct: 125 AIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDG 162
>gi|169159264|tpe|CAP64331.1| TPA: putative GID1-like gibberellin receptor
[Aquilegia formosa x Aquilegia pubescens]
Length = 343
Score = 232 bits (590), Expect = 2e-059
Identities = 113/158 (71%), Positives = 131/158 (82%), Gaps = 1/158 (0%)
Frame = +2
Query: 41 NEVDLTDSKMVVPLNTWVLISNFKLSYNLLRRPDGTFNRHLAEFLDRKVAPNANPVDGVL 220
NEV++ +SKM VPLNTWVLISNFKL+Y +LRRPDGTFNR+LAEFLDRKV NANPVDGV
Sbjct: 5 NEVNINESKMAVPLNTWVLISNFKLAYTMLRRPDGTFNRNLAEFLDRKVPANANPVDGVF 64
Query: 221 SFDVIIDKGTSLLTRIYQPASADAPQPNILDFHKPVGVE-VLPVIIFFHGGSFAHSSANS 397
SFDVIID+ T LL RIY+ A+A QP+ + +P+ + V+PVI+FFHGGSFAHSSANS
Sbjct: 65 SFDVIIDRATGLLCRIYRQATAVPVQPSYMQLEQPLSSDVVVPVIVFFHGGSFAHSSANS 124
Query: 398 GIYDILCRRLVGNCKAVVVSVNYRRAPENRFLCTFKPG 511
IYD LCRRLV NCKAVVVSVNYRRAPENR+ C + G
Sbjct: 125 AIYDTLCRRLVRNCKAVVVSVNYRRAPENRYPCAYDDG 162
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 504,755,133,563
Number of Sequences: 7387702
Number of Extensions: 504755133563
Number of Successful Extensions: 299986299
Number of sequences better than 0.0: 0
|