BLASTX 7.6.2
Query= RU24024 /QuerySize=1124
(1123 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|14484934|gb|AAK62819.1| ubiquitin conjugating enzyme 2 [Lycop... 389 2e-106
gi|15240671|ref|NP_199854.1| UBC33 (UBIQUITIN-CONJUGATING ENZYME... 381 1e-103
gi|15220062|ref|NP_173172.1| UBC34 (UBIQUITIN-CONJUGATING ENZYME... 378 5e-103
gi|66354474|gb|AAY44872.1| ubiquitinating enzyme [Arabidopsis th... 346 4e-093
gi|66354476|gb|AAY44873.1| ubiquitinating enzyme [Arabidopsis th... 341 7e-092
>gi|14484934|gb|AAK62819.1| ubiquitin conjugating enzyme 2 [Lycopersicon
esculentum]
Length = 239
Score = 389 bits (999), Expect = 2e-106
Identities = 190/240 (79%), Positives = 214/240 (89%), Gaps = 3/240 (1%)
Frame = +3
Query: 132 MAEKSCIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGYYYGKIKF 311
MAEK+C+KRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGG+YYGKIKF
Sbjct: 1 MAEKACVKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKF 60
Query: 312 PPEYPYKPPGISMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 491
PPEYP+KPPGISMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP
Sbjct: 61 PPEYPFKPPGISMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 120
Query: 492 TTGSVNTTVAEKQRLAKTSLAFNAKNVTFRKMFPEYVEKYNQQQQQLSEQLNQEQVAS-E 668
TTGSV+TTVAEK++LAK SLAFN KN TFRK+FPEYVEKY +QQQLS Q EQV+S
Sbjct: 121 TTGSVSTTVAEKKKLAKASLAFNCKNPTFRKLFPEYVEKY--EQQQLSSQPVPEQVSSMP 178
Query: 669 SSQENSKPLLEKVDDSTAGGMKTVGALKDMRKNKKQSFPTWMMLLLISIFGVVMALPLLQ 848
+ + S+PLLE+ D+S + V LKD++ +++S PTW++LLL+SIFGVVMALPLLQ
Sbjct: 179 AGADKSRPLLEEHDNSPKDEVNRVKPLKDVKNQQRKSVPTWLLLLLVSIFGVVMALPLLQ 238
>gi|15240671|ref|NP_199854.1| UBC33 (UBIQUITIN-CONJUGATING ENZYME 33);
ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 243
Score = 381 bits (976), Expect = 1e-103
Identities = 188/244 (77%), Positives = 211/244 (86%), Gaps = 5/244 (2%)
Frame = +3
Query: 132 MAEKSCIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGYYYGKIKF 311
MAEK+CIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGG+YYGKIKF
Sbjct: 1 MAEKACIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKF 60
Query: 312 PPEYPYKPPGISMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 491
PPEYPYKPPGI+MTTPNGRF+TQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP
Sbjct: 61 PPEYPYKPPGITMTTPNGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 120
Query: 492 TTGSVNTTVAEKQRLAKTSLAFNAKNVTFRKMFPEYVEKYNQQQQQLSEQLNQEQVASES 671
TTGSVNT+VAEKQRLAK+SLAFN K+VTFRK+FPEYVEKY+QQQ E Q+ SE+
Sbjct: 121 TTGSVNTSVAEKQRLAKSSLAFNCKSVTFRKLFPEYVEKYSQQQVAEEEAATQQTTTSEN 180
Query: 672 ----SQENSKPLLEKVDDSTAGGMKTVGALKDMRKNKKQSFPTWMMLLLISIFGVVMALP 839
++N+K EK ++ VG LK+ R+NKK++ P W++LLL+SI GVVMALP
Sbjct: 181 QDFPQKDNAKVESEKSVGLKKESIQEVG-LKERRRNKKEALPGWIVLLLVSIVGVVMALP 239
Query: 840 LLQL 851
LLQL
Sbjct: 240 LLQL 243
>gi|15220062|ref|NP_173172.1| UBC34 (UBIQUITIN-CONJUGATING ENZYME 34);
ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 237
Score = 378 bits (970), Expect = 5e-103
Identities = 187/238 (78%), Positives = 204/238 (85%), Gaps = 5/238 (2%)
Frame = +3
Query: 132 MAEKSCIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGYYYGKIKF 311
MAEK+CIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGG+YYGKIKF
Sbjct: 1 MAEKACIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKF 60
Query: 312 PPEYPYKPPGISMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 491
PPEYPYKPPGI+MTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMD SP
Sbjct: 61 PPEYPYKPPGITMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSP 120
Query: 492 TTGSVNTTVAEKQRLAKTSLAFNAKNVTFRKMFPEYVEKYNQQQQQLSEQLNQEQVASES 671
TTGSVNTTV EKQRLAK+SLAFN K FRK+FPEYVEKYN QQQL+EQ + ES
Sbjct: 121 TTGSVNTTVIEKQRLAKSSLAFNCKTPAFRKLFPEYVEKYN--QQQLAEQATTQLTTPES 178
Query: 672 SQE-NSKPLLEKVDDSTAGGMKTVGALKDMRKNKKQSFPTWMMLLLISIFGVVMALPL 842
Q+ ++K EK D T G + G LK+ +KN KQ P W++LLL+S+FGVVMALPL
Sbjct: 179 PQKSDTKVESEKTIDPTKGDSE--GGLKERKKNNKQGLPAWIILLLVSVFGVVMALPL 234
>gi|66354474|gb|AAY44872.1| ubiquitinating enzyme [Arabidopsis thaliana]
Length = 219
Score = 346 bits (885), Expect = 4e-093
Identities = 170/220 (77%), Positives = 190/220 (86%), Gaps = 5/220 (2%)
Frame = +3
Query: 132 MAEKSCIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGYYYGKIKF 311
MAEK+CIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGG+YYGKIKF
Sbjct: 1 MAEKACIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKF 60
Query: 312 PPEYPYKPPGISMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 491
PPEYPYKPPGI+MTTPNGRF+TQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP
Sbjct: 61 PPEYPYKPPGITMTTPNGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 120
Query: 492 TTGSVNTTVAEKQRLAKTSLAFNAKNVTFRKMFPEYVEKYNQQQQQLSEQLNQEQVASES 671
TTGSVNT+VAEKQRLAK+SLAFN K+VTFRK+FPEYVEKY+QQQ E Q+ SE+
Sbjct: 121 TTGSVNTSVAEKQRLAKSSLAFNCKSVTFRKLFPEYVEKYSQQQVAEEEAATQQTTTSEN 180
Query: 672 ----SQENSKPLLEKVDDSTAGGMKTVGALKDMRKNKKQS 779
++N+K EK ++ VG LK+ R+NKK++
Sbjct: 181 QDFPQKDNAKVESEKSVGLKKESIQEVG-LKERRRNKKEA 219
>gi|66354476|gb|AAY44873.1| ubiquitinating enzyme [Arabidopsis thaliana]
Length = 213
Score = 341 bits (874), Expect = 7e-092
Identities = 170/213 (79%), Positives = 183/213 (85%), Gaps = 5/213 (2%)
Frame = +3
Query: 132 MAEKSCIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGYYYGKIKF 311
MAEK+CIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGG+YYGKIKF
Sbjct: 1 MAEKACIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKF 60
Query: 312 PPEYPYKPPGISMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 491
PPEYPYKPPGI+MTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMD SP
Sbjct: 61 PPEYPYKPPGITMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSP 120
Query: 492 TTGSVNTTVAEKQRLAKTSLAFNAKNVTFRKMFPEYVEKYNQQQQQLSEQLNQEQVASES 671
TTGSVNTTV EKQRLAK+SLAFN K FRK+FPEYVEKYN QQQL+EQ + ES
Sbjct: 121 TTGSVNTTVIEKQRLAKSSLAFNCKTPAFRKLFPEYVEKYN--QQQLAEQATTQLTTPES 178
Query: 672 SQE-NSKPLLEKVDDSTAGGMKTVGALKDMRKN 767
Q+ ++K EK D T G + G LK+ +KN
Sbjct: 179 PQKSDTKVESEKTIDPTKGDSE--GGLKERKKN 209
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 544,304,915,632
Number of Sequences: 7387702
Number of Extensions: 544304915632
Number of Successful Extensions: 309755150
Number of sequences better than 0.0: 0
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