BLASTX 7.6.2
Query= RU24174 /QuerySize=1059
(1058 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|118482898|gb|ABK93363.1| unknown [Populus trichocarpa] 434 9e-120
gi|77416969|gb|ABA81880.1| unknown [Solanum tuberosum] 426 1e-117
gi|15219257|ref|NP_173096.1| PAB1 (PROTEASOME SUBUNIT PAB1); pep... 424 6e-117
gi|15219317|ref|NP_178042.1| 20S proteasome alpha subunit B, put... 423 2e-116
gi|115453317|ref|NP_001050259.1| Os03g0387100 [Oryza sativa (jap... 414 1e-113
>gi|118482898|gb|ABK93363.1| unknown [Populus trichocarpa]
Length = 235
Score = 434 bits (1114), Expect = 9e-120
Identities = 220/235 (93%), Positives = 230/235 (97%)
Frame = +2
Query: 59 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEA 238
MGDSQYSFSLTTFSP+GKLVQIEHALTAVGSGQTSLGIKA+NGVVIATEKKLPSILVDE+
Sbjct: 1 MGDSQYSFSLTTFSPTGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDES 60
Query: 239 SVQKIQCLTPNIGVVYSGMGPDFRVLVRKSRKQAVQYHQLYKEPIPVTQLVRETAAVMQE 418
SVQKIQ LTPNIGVVYSGMGPDFRVLVRKSRKQA QYH+LYKEPIPVTQLVRETAAVMQE
Sbjct: 61 SVQKIQNLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYHRLYKEPIPVTQLVRETAAVMQE 120
Query: 419 FTQSGGVRPFGVSLLVAGFDDSGPQLFQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTD 598
FTQSGGVRPFGVSLLVAGFDD GPQL+QVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTD
Sbjct: 121 FTQSGGVRPFGVSLLVAGFDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTD 180
Query: 599 EIELEDAVHTAILTLKEGFEGQISGKNIEIGIIGEDKIFRVLSPAEIEDYLAEVE 763
++EL+DAVHTAILTLKEGFEGQISGKNIEIGIIG DK FRVL+PAEI+DYLAEVE
Sbjct: 181 DMELDDAVHTAILTLKEGFEGQISGKNIEIGIIGADKQFRVLTPAEIDDYLAEVE 235
>gi|77416969|gb|ABA81880.1| unknown [Solanum tuberosum]
Length = 235
Score = 426 bits (1095), Expect = 1e-117
Identities = 216/235 (91%), Positives = 227/235 (96%)
Frame = +2
Query: 59 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEA 238
MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKA+NGVVIATEKKLPSILVDE
Sbjct: 1 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDET 60
Query: 239 SVQKIQCLTPNIGVVYSGMGPDFRVLVRKSRKQAVQYHQLYKEPIPVTQLVRETAAVMQE 418
SVQKIQ LTPNIGVVYSGMGPD RVLVRKSRKQA QY++LYKE IPVTQLVRETAAVMQE
Sbjct: 61 SVQKIQTLTPNIGVVYSGMGPDSRVLVRKSRKQAEQYYRLYKESIPVTQLVRETAAVMQE 120
Query: 419 FTQSGGVRPFGVSLLVAGFDDSGPQLFQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTD 598
FTQSGGVRPFGVSLLVAG+DD GPQL+QVDPSGSYFSWKASAMGKNVSNAKTFLEKRYT+
Sbjct: 121 FTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTE 180
Query: 599 EIELEDAVHTAILTLKEGFEGQISGKNIEIGIIGEDKIFRVLSPAEIEDYLAEVE 763
E+EL+DAVHTAILTLKEGFEGQISGKNIEIGIIG DK+FRVL+PAEI+DYL EVE
Sbjct: 181 ELELDDAVHTAILTLKEGFEGQISGKNIEIGIIGNDKVFRVLTPAEIDDYLQEVE 235
>gi|15219257|ref|NP_173096.1| PAB1 (PROTEASOME SUBUNIT PAB1); peptidase
[Arabidopsis thaliana]
Length = 235
Score = 424 bits (1090), Expect = 6e-117
Identities = 215/235 (91%), Positives = 227/235 (96%)
Frame = +2
Query: 59 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEA 238
MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEA
Sbjct: 1 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEA 60
Query: 239 SVQKIQCLTPNIGVVYSGMGPDFRVLVRKSRKQAVQYHQLYKEPIPVTQLVRETAAVMQE 418
SVQKIQ LTPNIGVVYSGMGPDFRVLVRKSRKQA QY +LYKEPIPVTQLVRETA VMQE
Sbjct: 61 SVQKIQHLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQE 120
Query: 419 FTQSGGVRPFGVSLLVAGFDDSGPQLFQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTD 598
FTQSGGVRPFGVSLLVAG+DD GPQL+QVDPSGSYFSWKASAMGKNVSNAKTFLEKRYT+
Sbjct: 121 FTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTE 180
Query: 599 EIELEDAVHTAILTLKEGFEGQISGKNIEIGIIGEDKIFRVLSPAEIEDYLAEVE 763
++EL+DA+HTAILTLKEGFEG+IS KNIEIG IG DK+FRVL+PAEI+DYLAEVE
Sbjct: 181 DMELDDAIHTAILTLKEGFEGEISSKNIEIGKIGADKVFRVLTPAEIDDYLAEVE 235
>gi|15219317|ref|NP_178042.1| 20S proteasome alpha subunit B, putative
[Arabidopsis thaliana]
Length = 235
Score = 423 bits (1086), Expect = 2e-116
Identities = 214/235 (91%), Positives = 226/235 (96%)
Frame = +2
Query: 59 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEA 238
MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEA
Sbjct: 1 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEA 60
Query: 239 SVQKIQCLTPNIGVVYSGMGPDFRVLVRKSRKQAVQYHQLYKEPIPVTQLVRETAAVMQE 418
SVQKIQ LTPNIG VYSGMGPDFRVLVRKSRKQA QY +LYKEPIPVTQLVRETA VMQE
Sbjct: 61 SVQKIQHLTPNIGTVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQE 120
Query: 419 FTQSGGVRPFGVSLLVAGFDDSGPQLFQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTD 598
FTQSGGVRPFGVSLLVAG+DD GPQL+QVDPSGSYFSWKASAMGKNVSNAKTFLEKRYT+
Sbjct: 121 FTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTE 180
Query: 599 EIELEDAVHTAILTLKEGFEGQISGKNIEIGIIGEDKIFRVLSPAEIEDYLAEVE 763
++EL+DA+HTAILTLKEGFEG+IS KNIEIG IG DK+FRVL+PAEI+DYLAEVE
Sbjct: 181 DMELDDAIHTAILTLKEGFEGEISSKNIEIGKIGTDKVFRVLTPAEIDDYLAEVE 235
>gi|115453317|ref|NP_001050259.1| Os03g0387100 [Oryza sativa (japonica
cultivar-group)]
Length = 235
Score = 414 bits (1062), Expect = 1e-113
Identities = 208/235 (88%), Positives = 225/235 (95%)
Frame = +2
Query: 59 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEA 238
MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKA+NGVVIATEKKLPSILVDE
Sbjct: 1 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDET 60
Query: 239 SVQKIQCLTPNIGVVYSGMGPDFRVLVRKSRKQAVQYHQLYKEPIPVTQLVRETAAVMQE 418
SVQKIQ LTPNIGVVYSGMGPDFRVLVRKSRKQA QY++LYKE IPVTQLVRETAAVMQE
Sbjct: 61 SVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQE 120
Query: 419 FTQSGGVRPFGVSLLVAGFDDSGPQLFQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTD 598
FTQSGGVRPFGVSLL+AG+DD+GPQL+QVDPSGSYFSWKASAMGKNVSNAKTFLEKRYT+
Sbjct: 121 FTQSGGVRPFGVSLLIAGYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTE 180
Query: 599 EIELEDAVHTAILTLKEGFEGQISGKNIEIGIIGEDKIFRVLSPAEIEDYLAEVE 763
++EL+DA+HTAILTLKEG+EGQIS NIEIGII D+ F+VLSPAEI+D+L EVE
Sbjct: 181 DMELDDAIHTAILTLKEGYEGQISANNIEIGIIRSDREFKVLSPAEIKDFLEEVE 235
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 544,304,915,632
Number of Sequences: 7387702
Number of Extensions: 544304915632
Number of Successful Extensions: 309755150
Number of sequences better than 0.0: 0
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