BLASTX 7.6.2
Query= RU24209 /QuerySize=842
(841 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15224782|ref|NP_179538.1| NAP1;2/NFA2 (NUCLEOSOME ASSEMBLY PR... 365 3e-099
gi|145329176|ref|NP_001077917.1| NAP1;2/NFA2 (NUCLEOSOME ASSEMBL... 365 3e-099
gi|549975|gb|AAA50234.1| nucleosome assembly protein I-like prot... 352 2e-095
gi|1161252|gb|AAA88792.1| nucleosome assembly protein 1 350 9e-095
gi|45433313|emb|CAD27460.1| nucleosome assembly protein 1-like p... 349 3e-094
>gi|15224782|ref|NP_179538.1| NAP1;2/NFA2 (NUCLEOSOME ASSEMBLY PROTEIN1;2); DNA
binding [Arabidopsis thaliana]
Length = 379
Score = 365 bits (936), Expect = 3e-099
Identities = 180/245 (73%), Positives = 209/245 (85%), Gaps = 8/245 (3%)
Frame = +2
Query: 125 MSADKDNNINMADLATALKEENQEGILNALKGL---AGGQHVEEVLSSLSPNVRKRVDFL 295
MS DKD ++NM+DL+TAL EE++ G++NALK GQH +VL +L+P VRKRV+FL
Sbjct: 1 MSNDKD-SMNMSDLSTALNEEDRAGLVNALKNKLQNLAGQH-SDVLENLTPPVRKRVEFL 58
Query: 296 REIQSQHDELETKFFEERAALEARYQKLYQPLYNKRYEIVTGAVEAEGVTTEAST---NE 466
REIQ+Q+DE+E KFFEERAALEA+YQKLYQPLY KRYEIV G VE EG E + +
Sbjct: 59 REIQNQYDEMEAKFFEERAALEAKYQKLYQPLYTKRYEIVNGVVEVEGAAEEVKSEQGED 118
Query: 467 EDAEDKGVPDFWLNALKNNDVLSEEITERDEGALKYLKDIKWARIDNPKGFKLEFYFDTN 646
+ AE+KGVPDFWL ALKNN++ +EEITERDEGALKYLKDIKW+R++ PKGFKLEF+FD N
Sbjct: 119 KSAEEKGVPDFWLIALKNNEITAEEITERDEGALKYLKDIKWSRVEEPKGFKLEFFFDQN 178
Query: 647 PYFKNTVLTKTYHMIDEDEPILEKAIGTEIEWYPGKCLTQKLPKKKPKKGSKNNKPITKT 826
PYFKNTVLTKTYHMIDEDEPILEKA+GTEIEWYPGKCLTQK+ KKKPKKGSKN KPITKT
Sbjct: 179 PYFKNTVLTKTYHMIDEDEPILEKALGTEIEWYPGKCLTQKILKKKPKKGSKNTKPITKT 238
Query: 827 EDCES 841
EDCES
Sbjct: 239 EDCES 243
>gi|145329176|ref|NP_001077917.1| NAP1;2/NFA2 (NUCLEOSOME ASSEMBLY PROTEIN1;2)
[Arabidopsis thaliana]
Length = 373
Score = 365 bits (936), Expect = 3e-099
Identities = 180/245 (73%), Positives = 209/245 (85%), Gaps = 8/245 (3%)
Frame = +2
Query: 125 MSADKDNNINMADLATALKEENQEGILNALKGL---AGGQHVEEVLSSLSPNVRKRVDFL 295
MS DKD ++NM+DL+TAL EE++ G++NALK GQH +VL +L+P VRKRV+FL
Sbjct: 1 MSNDKD-SMNMSDLSTALNEEDRAGLVNALKNKLQNLAGQH-SDVLENLTPPVRKRVEFL 58
Query: 296 REIQSQHDELETKFFEERAALEARYQKLYQPLYNKRYEIVTGAVEAEGVTTEAST---NE 466
REIQ+Q+DE+E KFFEERAALEA+YQKLYQPLY KRYEIV G VE EG E + +
Sbjct: 59 REIQNQYDEMEAKFFEERAALEAKYQKLYQPLYTKRYEIVNGVVEVEGAAEEVKSEQGED 118
Query: 467 EDAEDKGVPDFWLNALKNNDVLSEEITERDEGALKYLKDIKWARIDNPKGFKLEFYFDTN 646
+ AE+KGVPDFWL ALKNN++ +EEITERDEGALKYLKDIKW+R++ PKGFKLEF+FD N
Sbjct: 119 KSAEEKGVPDFWLIALKNNEITAEEITERDEGALKYLKDIKWSRVEEPKGFKLEFFFDQN 178
Query: 647 PYFKNTVLTKTYHMIDEDEPILEKAIGTEIEWYPGKCLTQKLPKKKPKKGSKNNKPITKT 826
PYFKNTVLTKTYHMIDEDEPILEKA+GTEIEWYPGKCLTQK+ KKKPKKGSKN KPITKT
Sbjct: 179 PYFKNTVLTKTYHMIDEDEPILEKALGTEIEWYPGKCLTQKILKKKPKKGSKNTKPITKT 238
Query: 827 EDCES 841
EDCES
Sbjct: 239 EDCES 243
>gi|549975|gb|AAA50234.1| nucleosome assembly protein I-like protein; similar to
mouse nap I, PIR Accession Number JS0707
Length = 382
Score = 352 bits (903), Expect = 2e-095
Identities = 180/257 (70%), Positives = 209/257 (81%), Gaps = 13/257 (5%)
Frame = +2
Query: 98 SLSAIRPVRMSADKDNNINMADLATALKEENQEGILNALK----GLAGGQHVEEVLSSLS 265
SLS+ P +MS DKD + N++DL ALK+E++ G++NALK LAG + +VL +L+
Sbjct: 2 SLSSPNPQKMSNDKD-SFNVSDLTAALKDEDRAGLVNALKNKLQNLAGQR--SDVLENLT 58
Query: 266 PNVRKRVDFLREIQSQHDELETKFFEERAALEARYQKLYQPLYNKRYEIVTGAVEAEGVT 445
PNVRKRVD LR+IQSQHDELE KF EERA LEA+YQ LYQPLY KRYEIV G E E +
Sbjct: 59 PNVRKRVDALRDIQSQHDELEAKFREERAILEAKYQTLYQPLYVKRYEIVNGTTEVE-LA 117
Query: 446 TEAST-----NEEDAEDKGVPDFWLNALKNNDVLSEEITERDEGALKYLKDIKWARIDNP 610
E T E+ AE+KGVP FWL ALKNNDV+SEE+TERDEGALKYLKDIKW +I+ P
Sbjct: 118 PEDDTKVDQGEEKTAEEKGVPSFWLTALKNNDVISEEVTERDEGALKYLKDIKWCKIEEP 177
Query: 611 KGFKLEFYFDTNPYFKNTVLTKTYHMIDEDEPILEKAIGTEIEWYPGKCLTQKLPKKKPK 790
KGFKLEF+FDTNPYFKNTVLTK+YHMIDEDEP+LEKA+GTEI+WYPGKCLTQK+ KKKPK
Sbjct: 178 KGFKLEFFFDTNPYFKNTVLTKSYHMIDEDEPLLEKAMGTEIDWYPGKCLTQKILKKKPK 237
Query: 791 KGSKNNKPITKTEDCES 841
KGSKN KPITK EDCES
Sbjct: 238 KGSKNTKPITKLEDCES 254
>gi|1161252|gb|AAA88792.1| nucleosome assembly protein 1
Length = 358
Score = 350 bits (897), Expect = 9e-095
Identities = 170/238 (71%), Positives = 198/238 (83%), Gaps = 6/238 (2%)
Frame = +2
Query: 140 DNNINMADLATALKEENQEGILNALK----GLAGGQHVEEVLSSLSPNVRKRVDFLREIQ 307
++NI + DL +AL EEN+ ++NALK LAG +VL +LSPNVRKRV+ LREIQ
Sbjct: 3 NDNIAVTDLTSALNEENRADLVNALKSKIQSLAGAH--SDVLETLSPNVRKRVESLREIQ 60
Query: 308 SQHDELETKFFEERAALEARYQKLYQPLYNKRYEIVTGAVEAEGVTTEASTNEEDAEDKG 487
+HDELE F +ER ALEA+YQKLYQPLY KRYEIV G E EG E++ E+ ++KG
Sbjct: 61 GKHDELEADFLKEREALEAKYQKLYQPLYTKRYEIVNGVTEVEGAANESTDESEENKEKG 120
Query: 488 VPDFWLNALKNNDVLSEEITERDEGALKYLKDIKWARIDNPKGFKLEFYFDTNPYFKNTV 667
VP FWLNA++NNDVL+EEI+ERDEGALK+LKDIKW+RI+NPKGFKL+F+FDTNPYF NTV
Sbjct: 121 VPSFWLNAMENNDVLAEEISERDEGALKFLKDIKWSRIENPKGFKLDFFFDTNPYFSNTV 180
Query: 668 LTKTYHMIDEDEPILEKAIGTEIEWYPGKCLTQKLPKKKPKKGSKNNKPITKTEDCES 841
LTKTYHMIDEDEPILEKAIGTEIEWYPGKCLTQK+ KKKPKKGSKN KPITKTE CES
Sbjct: 181 LTKTYHMIDEDEPILEKAIGTEIEWYPGKCLTQKVLKKKPKKGSKNAKPITKTESCES 238
>gi|45433313|emb|CAD27460.1| nucleosome assembly protein 1-like protein 1
[Nicotiana tabacum]
Length = 374
Score = 349 bits (893), Expect = 3e-094
Identities = 179/247 (72%), Positives = 199/247 (80%), Gaps = 11/247 (4%)
Frame = +2
Query: 125 MSADKDNNINMADLATALKEENQEGILNALKG----LAGGQHVEEVLSSLSPNVRKRVDF 292
MS KD N N+ADL AL ++E ++NALK + G VL LSPNVRKRV+
Sbjct: 1 MSNTKD-NFNVADLTAALGAGDREDLVNALKNKLQDITG--KPTNVLECLSPNVRKRVEV 57
Query: 293 LREIQSQHDELETKFFEERAALEARYQKLYQPLYNKRYEIVTGAVEAEGVTTEAST---- 460
L+EIQSQHDELE KF+EERA LEA+YQKLYQPLY KR++IV G VE TEA+
Sbjct: 58 LKEIQSQHDELEAKFYEERAVLEAKYQKLYQPLYTKRFDIVNGVVEVNTSETEAAAMDQD 117
Query: 461 NEEDAEDKGVPDFWLNALKNNDVLSEEITERDEGALKYLKDIKWARIDNPKGFKLEFYFD 640
+EDA KGVPDFWL A+KNNDVLSEEITERDEGALK+LKDIKWA+IDNPKGFKLEF+FD
Sbjct: 118 EDEDAVGKGVPDFWLIAMKNNDVLSEEITERDEGALKFLKDIKWAKIDNPKGFKLEFFFD 177
Query: 641 TNPYFKNTVLTKTYHMIDEDEPILEKAIGTEIEWYPGKCLTQKLPKKKPKKGSKNNKPIT 820
TNPYF NTVLTKTYHMIDEDEPILEKA+GTEIEWYPGKCLTQK+ KKKPKKGSKN KPIT
Sbjct: 178 TNPYFTNTVLTKTYHMIDEDEPILEKALGTEIEWYPGKCLTQKILKKKPKKGSKNAKPIT 237
Query: 821 KTEDCES 841
KTE CES
Sbjct: 238 KTEQCES 244
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 544,304,915,632
Number of Sequences: 7387702
Number of Extensions: 544304915632
Number of Successful Extensions: 309755150
Number of sequences better than 0.0: 0
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