BLASTX 7.6.2
Query= RU24267 /QuerySize=547
(546 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|124360158|gb|ABN08174.1| Histone H2A; Histone-fold [Medicago ... 253 6e-066
gi|147855438|emb|CAN79609.1| hypothetical protein [Vitis vinifera] 252 1e-065
gi|147815277|emb|CAN70026.1| hypothetical protein [Vitis vinifera] 251 3e-065
gi|15214035|sp|O65759|H2AX_CICAR Histone H2AX 250 4e-065
gi|15223948|ref|NP_172363.1| G-H2AX/GAMMA-H2AX/H2AXA/HTA5; DNA b... 249 9e-065
>gi|124360158|gb|ABN08174.1| Histone H2A; Histone-fold [Medicago truncatula]
Length = 139
Score = 253 bits (645), Expect = 6e-066
Identities = 129/137 (94%), Positives = 133/137 (97%)
Frame = +1
Query: 46 SSPTSKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEY 225
S+ T+KGGRGKPKA KSVSRSSKAGLQFPVGRIARFLK+GKYAERVGAGAPVYLSAVLEY
Sbjct: 3 STGTTKGGRGKPKAAKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEY 62
Query: 226 LAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLP 405
LAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQ LLP
Sbjct: 63 LAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQTLLP 122
Query: 406 KKTGKGKGDIGSASQEF 456
KK GKGKG+IGSASQEF
Sbjct: 123 KKVGKGKGEIGSASQEF 139
>gi|147855438|emb|CAN79609.1| hypothetical protein [Vitis vinifera]
Length = 137
Score = 252 bits (643), Expect = 1e-065
Identities = 128/136 (94%), Positives = 134/136 (98%)
Frame = +1
Query: 49 SPTSKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYL 228
S ++KGGRGKPKATKSVSRS+KAGLQFPVGRIARFLK+GKYAERVGAGAPVYLSAVLEYL
Sbjct: 2 SSSNKGGRGKPKATKSVSRSAKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYL 61
Query: 229 AAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPK 408
AAEVLELAGNAARDNKK+RIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPK
Sbjct: 62 AAEVLELAGNAARDNKKSRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPK 121
Query: 409 KTGKGKGDIGSASQEF 456
KTG GKG+IGSASQEF
Sbjct: 122 KTGAGKGEIGSASQEF 137
>gi|147815277|emb|CAN70026.1| hypothetical protein [Vitis vinifera]
Length = 139
Score = 251 bits (639), Expect = 3e-065
Identities = 127/137 (92%), Positives = 134/137 (97%)
Frame = +1
Query: 46 SSPTSKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEY 225
S+ ++KGGRGKPKA+KSVSRS KAGLQFPVGRIARFLK+GKYAERVGAGAPVYLSAVLEY
Sbjct: 3 STGSTKGGRGKPKASKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEY 62
Query: 226 LAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLP 405
LAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLG+VTIANGGVLPNIHQ LLP
Sbjct: 63 LAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLP 122
Query: 406 KKTGKGKGDIGSASQEF 456
KKTGKGKG+IGSASQEF
Sbjct: 123 KKTGKGKGEIGSASQEF 139
>gi|15214035|sp|O65759|H2AX_CICAR Histone H2AX
Length = 139
Score = 250 bits (638), Expect = 4e-065
Identities = 127/137 (92%), Positives = 133/137 (97%)
Frame = +1
Query: 46 SSPTSKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEY 225
S+ T+KGGRGKPKA+KSVSRSSKAGLQFPVGRIARFLK+GKYAERVGAGAPVYLSAVLEY
Sbjct: 3 STATTKGGRGKPKASKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEY 62
Query: 226 LAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLP 405
LAAEVLELAGNAARDNK NRIVPRHIQLAVRNDEELSKLLG+VTIANGGVLPNIHQ LLP
Sbjct: 63 LAAEVLELAGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLP 122
Query: 406 KKTGKGKGDIGSASQEF 456
KK GKGKG+IGSASQEF
Sbjct: 123 KKVGKGKGEIGSASQEF 139
>gi|15223948|ref|NP_172363.1| G-H2AX/GAMMA-H2AX/H2AXA/HTA5; DNA binding
[Arabidopsis thaliana]
Length = 142
Score = 249 bits (635), Expect = 9e-065
Identities = 128/136 (94%), Positives = 130/136 (95%)
Frame = +1
Query: 49 SPTSKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYL 228
S T+KGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYL
Sbjct: 7 SGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYL 66
Query: 229 AAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPK 408
AAEVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLG+VTIANGGVLPNIHQ LLP
Sbjct: 67 AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPS 126
Query: 409 KTGKGKGDIGSASQEF 456
K GK KGDIGSASQEF
Sbjct: 127 KVGKNKGDIGSASQEF 142
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 544,304,915,632
Number of Sequences: 7387702
Number of Extensions: 544304915632
Number of Successful Extensions: 309755150
Number of sequences better than 0.0: 0
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