BLASTX 7.6.2
Query= RU24457 /QuerySize=1118
(1117 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|118487534|gb|ABK95594.1| unknown [Populus trichocarpa] 454 7e-126
gi|157356213|emb|CAO50140.1| unnamed protein product [Vitis vini... 453 2e-125
gi|116563481|gb|ABJ99761.1| PHD4 [Medicago truncatula] 445 3e-123
gi|118482703|gb|ABK93270.1| unknown [Populus trichocarpa] 438 7e-121
gi|147783008|emb|CAN72300.1| hypothetical protein [Vitis vinifera] 414 6e-114
>gi|118487534|gb|ABK95594.1| unknown [Populus trichocarpa]
Length = 238
Score = 454 bits (1167), Expect = 7e-126
Identities = 211/238 (88%), Positives = 228/238 (95%), Gaps = 1/238 (0%)
Frame = +3
Query: 129 MEMATSPRTVEEIFKDYGARRAAVVRALTYDVDEFYGLCDPEKENLCLYGHPNESWEVTL 308
MEM +SPRTVEEIFKD+ ARRAAVVRALTYDVD FYGLCDP+KENLCLYGHPNE+WEVTL
Sbjct: 1 MEMTSSPRTVEEIFKDFSARRAAVVRALTYDVDGFYGLCDPDKENLCLYGHPNETWEVTL 60
Query: 309 PAEEVPPELPEPALGINFARDGMNRKDWLSLVAVHSDSWLLSVAFYFGARLNRNERKRLF 488
PAEEVPPELPEPALGINFARDGMNRKDWLSLVAVHSDSWLLSVAFY GARLNRNERKRLF
Sbjct: 61 PAEEVPPELPEPALGINFARDGMNRKDWLSLVAVHSDSWLLSVAFYLGARLNRNERKRLF 120
Query: 489 SLINDLPTVFEVVTDRKPAKDKPSVDSGSKSRGSTKRSGDGIMKSNPKLADESFEEEDDE 668
SLINDLPTVFEVVT+RKP K+KPSVDSGSKSRGS KRS DG+ KSNPKL ++SFEEE+DE
Sbjct: 121 SLINDLPTVFEVVTERKPVKEKPSVDSGSKSRGSIKRSSDGLTKSNPKLTEDSFEEEEDE 180
Query: 669 HSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSLKRSR 842
H++TLCGSCGGNYN+DEFWIGCD+CERW+HGKCVKITPAKAE+IKQYKCPSC +KRSR
Sbjct: 181 HTQTLCGSCGGNYNSDEFWIGCDVCERWYHGKCVKITPAKAESIKQYKCPSC-MKRSR 237
>gi|157356213|emb|CAO50140.1| unnamed protein product [Vitis vinifera]
Length = 243
Score = 453 bits (1164), Expect = 2e-125
Identities = 218/243 (89%), Positives = 227/243 (93%), Gaps = 4/243 (1%)
Frame = +3
Query: 129 MEMA---TSPRTVEEIFKDYGARRAAVVRALTYDVDEFYGLCDPEKENLCLYGHPNESWE 299
MEMA +SPRTVEEIFKDY RRA VVRALTYDVDEFY LCDPEKENLCLYGHPN++WE
Sbjct: 1 MEMASISSSPRTVEEIFKDYSGRRAGVVRALTYDVDEFYKLCDPEKENLCLYGHPNDTWE 60
Query: 300 VTLPAEEVPPELPEPALGINFARDGMNRKDWLSLVAVHSDSWLLSVAFYFGARLNRNERK 479
VTLPAEEVPPELPEPALGINFARDGMNRKDWLSLVAVHSDSWLLS AFY GARLNRNERK
Sbjct: 61 VTLPAEEVPPELPEPALGINFARDGMNRKDWLSLVAVHSDSWLLSAAFYLGARLNRNERK 120
Query: 480 RLFSLINDLPTVFEVVTDRKPAKDKPSVDSGSKSRGSTKRSGDGIMKSNPKL-ADESFEE 656
RLFS+INDLPTVFEVVT+RKP KDKPSVDSGSKSR STKR +G +KS PKL ADESFEE
Sbjct: 121 RLFSMINDLPTVFEVVTERKPIKDKPSVDSGSKSRVSTKRGNEGQVKSTPKLAADESFEE 180
Query: 657 EDDEHSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSLKR 836
E+DEHSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAE+IKQYKCPSCSLKR
Sbjct: 181 EEDEHSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAESIKQYKCPSCSLKR 240
Query: 837 SRQ 845
SRQ
Sbjct: 241 SRQ 243
>gi|116563481|gb|ABJ99761.1| PHD4 [Medicago truncatula]
Length = 254
Score = 445 bits (1144), Expect = 3e-123
Identities = 208/237 (87%), Positives = 224/237 (94%), Gaps = 1/237 (0%)
Frame = +3
Query: 129 MEMATSPRTVEEIFKDYGARRAAVVRALTYDVDEFYGLCDPEKENLCLYGHPNESWEVTL 308
MEMA+SPRTVEEIFKD+ +RR +VRALT DVDEFY LCDP+K+NLCLYGH NESWEVTL
Sbjct: 1 MEMASSPRTVEEIFKDFSSRRDGIVRALTQDVDEFYALCDPDKDNLCLYGHTNESWEVTL 60
Query: 309 PAEEVPPELPEPALGINFARDGMNRKDWLSLVAVHSDSWLLSVAFYFGARLNRNERKRLF 488
PAEEVPPELPEPALGINFARDGMNR+DWLSLVAVHSDSWLLSVAFY GARLNRNERKRLF
Sbjct: 61 PAEEVPPELPEPALGINFARDGMNRRDWLSLVAVHSDSWLLSVAFYLGARLNRNERKRLF 120
Query: 489 SLINDLPTVFEVVTDRKPAKDKPSVDSGSKSRGSTKRSGDGIMKSNPKLA-DESFEEEDD 665
SLIN+LPTVFEVVTDRKP KDKP+VDSGSKSRGSTKRS DG +KSNPKL D+ +EEE+D
Sbjct: 121 SLINELPTVFEVVTDRKPIKDKPTVDSGSKSRGSTKRSSDGQVKSNPKLVDDQGYEEEED 180
Query: 666 EHSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSLKR 836
EHSETLCGSCGGNYNADEFWIGCDICERW+HGKCVKITPAKAE+IKQYKCPSCS+KR
Sbjct: 181 EHSETLCGSCGGNYNADEFWIGCDICERWYHGKCVKITPAKAESIKQYKCPSCSIKR 237
>gi|118482703|gb|ABK93270.1| unknown [Populus trichocarpa]
Length = 237
Score = 438 bits (1124), Expect = 7e-121
Identities = 206/237 (86%), Positives = 225/237 (94%), Gaps = 2/237 (0%)
Frame = +3
Query: 129 MEMATSPRTVEEIFKDYGARRAAVVRALTYDVDEFYGLCDPEKENLCLYGHPNESWEVTL 308
MEMA+S RTVEEIFKD+ ARRAAVVRALT+DVD FYGLCDP+KENLCLYGHP+E+WEV L
Sbjct: 1 MEMASSARTVEEIFKDFSARRAAVVRALTHDVDAFYGLCDPDKENLCLYGHPSETWEVAL 60
Query: 309 PAEEVPPELPEPALGINFARDGMNRKDWLSLVAVHSDSWLLSVAFYFGARLNRNERKRLF 488
PAEEVPPELPEPALGINFARDGMNRKDWLSLVAVHSDSWLLSVAFY GARLNRNERKRLF
Sbjct: 61 PAEEVPPELPEPALGINFARDGMNRKDWLSLVAVHSDSWLLSVAFYLGARLNRNERKRLF 120
Query: 489 SLINDLPTVFEVVTDRKPAKDKPSVDSGSKSRGSTKRSGDGIMKSNPKLADESFEEEDDE 668
SLINDLPTVFEVVT+RKP K+KPSVDSGSKSRGS KRS DG MKSNPKL ++S+E+E+D
Sbjct: 121 SLINDLPTVFEVVTERKPVKEKPSVDSGSKSRGSIKRSSDGQMKSNPKLMEDSYEDEED- 179
Query: 669 HSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSLKRS 839
H+ETLCGSCGGNYNADEFWIGCD+CERW+HGKCVKITPAKA++IKQYKCPSC +KRS
Sbjct: 180 HTETLCGSCGGNYNADEFWIGCDVCERWYHGKCVKITPAKADSIKQYKCPSC-MKRS 235
>gi|147783008|emb|CAN72300.1| hypothetical protein [Vitis vinifera]
Length = 241
Score = 414 bits (1064), Expect = 6e-114
Identities = 191/234 (81%), Positives = 213/234 (91%)
Frame = +3
Query: 141 TSPRTVEEIFKDYGARRAAVVRALTYDVDEFYGLCDPEKENLCLYGHPNESWEVTLPAEE 320
+SPRTVE+IFKDY ARR+ VV+ALT+DVDEFY LCDPEKENLCLYGHPN SW V +PAEE
Sbjct: 6 SSPRTVEDIFKDYKARRSGVVQALTFDVDEFYALCDPEKENLCLYGHPNGSWHVAMPAEE 65
Query: 321 VPPELPEPALGINFARDGMNRKDWLSLVAVHSDSWLLSVAFYFGARLNRNERKRLFSLIN 500
VPPELPEPALGINFARDGMNR+DWL+LVAVHSDSWLLSVAFYFGA LNRN+RKRLFS+IN
Sbjct: 66 VPPELPEPALGINFARDGMNRRDWLALVAVHSDSWLLSVAFYFGASLNRNDRKRLFSMIN 125
Query: 501 DLPTVFEVVTDRKPAKDKPSVDSGSKSRGSTKRSGDGIMKSNPKLADESFEEEDDEHSET 680
DLPTVFE VT K KDKP++DSGSKS+ STKRS DG ++++ + DE + E+DDEHSET
Sbjct: 126 DLPTVFEAVTQGKLVKDKPTMDSGSKSKSSTKRSIDGQVRNDLRPRDEGYVEDDDEHSET 185
Query: 681 LCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSLKRSR 842
LCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAE+IKQYKCPSCSLK+ R
Sbjct: 186 LCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAESIKQYKCPSCSLKKGR 239
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 544,304,915,632
Number of Sequences: 7387702
Number of Extensions: 544304915632
Number of Successful Extensions: 309755150
Number of sequences better than 0.0: 0
|