BLASTX 7.6.2
Query= RU24602 /QuerySize=908
(907 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|12229897|sp|O48551.2|PSA6_SOYBN RecName: Full=Proteasome subu... 421 5e-116
gi|12229948|sp|Q9XG77.1|PSA6_TOBAC RecName: Full=Proteasome subu... 418 5e-115
gi|147797489|emb|CAN73517.1| hypothetical protein [Vitis vinifera] 415 3e-114
gi|118489185|gb|ABK96399.1| unknown [Populus trichocarpa x Popul... 406 1e-111
gi|15238554|ref|NP_198409.1| PAA1 (20S proteasome alpha subunit ... 405 4e-111
>gi|12229897|sp|O48551.2|PSA6_SOYBN RecName: Full=Proteasome subunit alpha
type-6; AltName: Full=20S proteasome alpha subunit A; AltName: Full=20S
proteasome subunit alpha-1; AltName: Full=Proteasome iota subunit
Length = 246
Score = 421 bits (1081), Expect = 5e-116
Identities = 207/225 (92%), Positives = 218/225 (96%)
Frame = -3
Query: 827 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVRGKDSVCVVTQKKVPDKL 648
MSRGSGGGY+RHITIFSPEGRLFQVEYAFKAVK+AGITSIGVRGKDS+CVVT KKVPDKL
Sbjct: 1 MSRGSGGGYNRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSICVVTHKKVPDKL 60
Query: 647 LDQTSVTHLFPITKFLGLLATGMTADARTLVSQARNEAADFRFKNGYEMPVDVLANWIAN 468
LD TSVTHLFPITK+LGLLATGMTADARTLV QARNEAA+FRF GYEMPVDVLA WIA+
Sbjct: 61 LDNTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFTYGYEMPVDVLAKWIAD 120
Query: 467 KSQVYTQHAYMRPLGVVAMVLGVDEDTGPQLYKCDPAGHYFGHKATSAGLKEQEAINFLE 288
KSQVYTQHAYMRPLGVVAMVLG+D++ GPQLYKCDPAGHYFGHKATSAGLK+QEAINFLE
Sbjct: 121 KSQVYTQHAYMRPLGVVAMVLGIDDEYGPQLYKCDPAGHYFGHKATSAGLKDQEAINFLE 180
Query: 287 KKMKNDPSFTYEETVQTAISALQSVLQEDFKATEIEVGVVRKENP 153
KKMKNDPSFTYEETVQTAISALQSVLQEDFKATEIEVGVVRK+NP
Sbjct: 181 KKMKNDPSFTYEETVQTAISALQSVLQEDFKATEIEVGVVRKDNP 225
>gi|12229948|sp|Q9XG77.1|PSA6_TOBAC RecName: Full=Proteasome subunit alpha
type-6; AltName: Full=20S proteasome alpha subunit A; AltName: Full=20S
proteasome subunit alpha-1
Length = 246
Score = 418 bits (1072), Expect = 5e-115
Identities = 204/225 (90%), Positives = 220/225 (97%)
Frame = -3
Query: 827 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVRGKDSVCVVTQKKVPDKL 648
MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVK+AGITSIGVRGKDSVCVVTQKKVPDKL
Sbjct: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKL 60
Query: 647 LDQTSVTHLFPITKFLGLLATGMTADARTLVSQARNEAADFRFKNGYEMPVDVLANWIAN 468
LDQTSV+HLFPITK+LGLLATGMTADARTLV QARNEAA+FRFK GYEMPVDVL+ WIA+
Sbjct: 61 LDQTSVSHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFKYGYEMPVDVLSKWIAD 120
Query: 467 KSQVYTQHAYMRPLGVVAMVLGVDEDTGPQLYKCDPAGHYFGHKATSAGLKEQEAINFLE 288
KSQVYTQHAYMRPLGVVAM+LG+DE+ GPQL+KCDPAGH+FGHKATSAG KEQEAINFLE
Sbjct: 121 KSQVYTQHAYMRPLGVVAMILGIDEEKGPQLFKCDPAGHFFGHKATSAGSKEQEAINFLE 180
Query: 287 KKMKNDPSFTYEETVQTAISALQSVLQEDFKATEIEVGVVRKENP 153
KKMKNDP+F+YEETVQTAISALQSVLQEDFKA+EIEVGVV+KE+P
Sbjct: 181 KKMKNDPAFSYEETVQTAISALQSVLQEDFKASEIEVGVVKKEDP 225
>gi|147797489|emb|CAN73517.1| hypothetical protein [Vitis vinifera]
Length = 246
Score = 415 bits (1065), Expect = 3e-114
Identities = 202/226 (89%), Positives = 219/226 (96%)
Frame = -3
Query: 827 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVRGKDSVCVVTQKKVPDKL 648
MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVK++GITSIGVRGKDSVCVVTQKKVPDKL
Sbjct: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKASGITSIGVRGKDSVCVVTQKKVPDKL 60
Query: 647 LDQTSVTHLFPITKFLGLLATGMTADARTLVSQARNEAADFRFKNGYEMPVDVLANWIAN 468
LDQTSVTHLFPITKFLGLLATGMTADARTLV QARNEAA+FRF+ GYEMPVDVLA WIA+
Sbjct: 61 LDQTSVTHLFPITKFLGLLATGMTADARTLVQQARNEAAEFRFRYGYEMPVDVLARWIAD 120
Query: 467 KSQVYTQHAYMRPLGVVAMVLGVDEDTGPQLYKCDPAGHYFGHKATSAGLKEQEAINFLE 288
KSQVYTQHAYMRPLGVVAM+LG+D++ GP+L+KCDPAGH+FGHKATSAGLKEQEAINFLE
Sbjct: 121 KSQVYTQHAYMRPLGVVAMILGIDDENGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE 180
Query: 287 KKMKNDPSFTYEETVQTAISALQSVLQEDFKATEIEVGVVRKENPA 150
KKMKNDP+F+Y+ETVQTAISALQSVLQEDFK EIEVGVVR ++PA
Sbjct: 181 KKMKNDPAFSYDETVQTAISALQSVLQEDFKPNEIEVGVVRTDSPA 226
>gi|118489185|gb|ABK96399.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 246
Score = 406 bits (1043), Expect = 1e-111
Identities = 201/224 (89%), Positives = 213/224 (95%)
Frame = -3
Query: 827 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVRGKDSVCVVTQKKVPDKL 648
MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVK+A TSIGVRGKDSVCVVTQKKVPDKL
Sbjct: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAATTSIGVRGKDSVCVVTQKKVPDKL 60
Query: 647 LDQTSVTHLFPITKFLGLLATGMTADARTLVSQARNEAADFRFKNGYEMPVDVLANWIAN 468
LDQTSVTHLFPITK+LGLLATGMTADAR LV QARNEAA+FRF+ GYEMPVD LA WIA+
Sbjct: 61 LDQTSVTHLFPITKYLGLLATGMTADARNLVQQARNEAAEFRFRYGYEMPVDALARWIAD 120
Query: 467 KSQVYTQHAYMRPLGVVAMVLGVDEDTGPQLYKCDPAGHYFGHKATSAGLKEQEAINFLE 288
KSQVYTQHAYMRPLGVVAMVLG+DE+ GPQLYK DPAGH+FGHKATSAGLKEQEAINFLE
Sbjct: 121 KSQVYTQHAYMRPLGVVAMVLGIDEENGPQLYKSDPAGHFFGHKATSAGLKEQEAINFLE 180
Query: 287 KKMKNDPSFTYEETVQTAISALQSVLQEDFKATEIEVGVVRKEN 156
KKMKNDP+ +YEETVQTAISALQSVLQE+FKATEIEVGVVR +N
Sbjct: 181 KKMKNDPALSYEETVQTAISALQSVLQENFKATEIEVGVVRTDN 224
>gi|15238554|ref|NP_198409.1| PAA1 (20S proteasome alpha subunit A1); peptidase
[Arabidopsis thaliana]
Length = 246
Score = 405 bits (1039), Expect = 4e-111
Identities = 196/225 (87%), Positives = 216/225 (96%)
Frame = -3
Query: 827 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVRGKDSVCVVTQKKVPDKL 648
MSRGSG GYDRHITIFSPEGRLFQVEYAFKAVK+AGITSIGVRGKDSVCVVTQKKVPDKL
Sbjct: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKL 60
Query: 647 LDQTSVTHLFPITKFLGLLATGMTADARTLVSQARNEAADFRFKNGYEMPVDVLANWIAN 468
LDQ+SVTHLFPITK++GL+ATG+TADAR+LV QARN+AA+FRF GYEMPVD+LA WIA+
Sbjct: 61 LDQSSVTHLFPITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIAD 120
Query: 467 KSQVYTQHAYMRPLGVVAMVLGVDEDTGPQLYKCDPAGHYFGHKATSAGLKEQEAINFLE 288
KSQVYTQHAYMRPLGVVAMV+GVDE+ GP LYKCDPAGH++GHKATSAG+KEQEA+NFLE
Sbjct: 121 KSQVYTQHAYMRPLGVVAMVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLE 180
Query: 287 KKMKNDPSFTYEETVQTAISALQSVLQEDFKATEIEVGVVRKENP 153
KKMK +PSFT++ETVQTAISALQSVLQEDFKATEIEVGVVR ENP
Sbjct: 181 KKMKENPSFTFDETVQTAISALQSVLQEDFKATEIEVGVVRAENP 225
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 544,304,915,632
Number of Sequences: 7387702
Number of Extensions: 544304915632
Number of Successful Extensions: 309755150
Number of sequences better than 0.0: 0
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