BLASTX 7.6.2
Query= RU24844 /QuerySize=710
(709 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157340810|emb|CAO47615.1| unnamed protein product [Vitis vini... 272 2e-071
gi|168059612|ref|XP_001781795.1| predicted protein [Physcomitrel... 179 2e-043
gi|30680338|ref|NP_849976.1| basic helix-loop-helix (bHLH) famil... 172 2e-041
gi|157348122|emb|CAO22832.1| unnamed protein product [Vitis vini... 165 4e-039
gi|168056080|ref|XP_001780050.1| predicted protein [Physcomitrel... 161 4e-038
>gi|157340810|emb|CAO47615.1| unnamed protein product [Vitis vinifera]
Length = 392
Score = 272 bits (694), Expect = 2e-071
Identities = 152/223 (68%), Positives = 169/223 (75%), Gaps = 23/223 (10%)
Frame = +3
Query: 84 GWTELGYGSC-GFEMNN-ISRTFSCPPKVAAETESNNAVAPAKISSPAGKESFKKRKADK 257
G+ G +C GFEMN+ SRT SC P AAE + +V P KI+S G+ESFKKRKADK
Sbjct: 59 GFESAGILNCSGFEMNHTTSRTSSC-PLAAAEAKVRESVLPEKIASAVGRESFKKRKADK 117
Query: 258 AQNNKAVAEDDSSDKRMKGCAEEGDSKITEQN----------------STKNNDRESSAD 389
Q+ K VAE+++ DKR+KGCAE+G+SKITE N +T NN+RE+SAD
Sbjct: 118 VQSPKVVAEEETKDKRIKGCAEDGESKITEANNNKNSTTTTTTTATTTTTNNNNRETSAD 177
Query: 390 TSKENSKASEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITG 569
T SK SEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITG
Sbjct: 178 T----SKVSEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITG 233
Query: 570 KAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDLTSTTCLQK 698
KAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLD L K
Sbjct: 234 KAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDNFLAK 276
>gi|168059612|ref|XP_001781795.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 656
Score = 179 bits (453), Expect = 2e-043
Identities = 107/196 (54%), Positives = 127/196 (64%), Gaps = 16/196 (8%)
Frame = +3
Query: 93 ELGYGSCGFEMNNISRTFSCPPKVAAETESNNAVAPAKISSPAGKESFKKRK-----ADK 257
EL + G E NN S + TE A A + SP G + +RK ADK
Sbjct: 328 ELAEVAAGLEPNNSS----------SVTEQQQASAASPARSPTGSDDSDRRKRKSSSADK 377
Query: 258 AQ-NNKAVAEDDSSDKRMKGCAEEGDSKITEQNSTKNNDRESSADTSKENSKASEVQKPD 434
++KA DS KR KG ++ E++S++N+ S KEN+ + + K D
Sbjct: 378 LDVDSKAADVADSQPKRCKGDNDDLVKAKAERSSSENSGDSGSPRAHKENNSSKDHAKQD 437
Query: 435 YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSL 614
YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC+K+TGKA MLDEIINYVQSL
Sbjct: 438 YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSL 497
Query: 615 QRQVEFLSMKLAAVNP 662
QRQVE LSMKLA+VNP
Sbjct: 498 QRQVENLSMKLASVNP 513
>gi|30680338|ref|NP_849976.1| basic helix-loop-helix (bHLH) family protein
[Arabidopsis thaliana]
Length = 337
Score = 172 bits (435), Expect = 2e-041
Identities = 97/185 (52%), Positives = 126/185 (68%), Gaps = 6/185 (3%)
Frame = +3
Query: 129 NISRTFSCPPKVAAETES--NNAVAPAKISSPAGKESFKKRKADKAQNNKAVAEDDSSDK 302
N + F P + + T S V ++ G+E+ +K + E+ ++K
Sbjct: 80 NYNMGFGPPHESISRTSSCHMEPVDTMEVLLKTGEETRAVALKNKRKPEVKTREEQKTEK 139
Query: 303 RMKGCAEEGDSKITEQNSTKNNDRESSADTSKENSK-ASEVQKPDYIHVRARRGQATDSH 479
++K E +++ + + + + E+S+DTSKE SK ASE QK DYIHVRARRGQATD H
Sbjct: 140 KIK---VEAETESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYIHVRARRGQATDRH 196
Query: 480 SLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVN 659
SLAER RREKIS++MKYLQD+VPGCNK+TGKAGMLDEIINYVQ LQRQVEFLSMKLA +N
Sbjct: 197 SLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLN 256
Query: 660 PRLDL 674
P L+L
Sbjct: 257 PELEL 261
>gi|157348122|emb|CAO22832.1| unnamed protein product [Vitis vinifera]
Length = 226
Score = 165 bits (416), Expect = 4e-039
Identities = 86/128 (67%), Positives = 98/128 (76%), Gaps = 2/128 (1%)
Frame = +3
Query: 315 CAEEGDSKITEQNSTKNNDRESSADTSKENSKASEVQKPDYIHVRARRGQATDSHSLAER 494
C ++ + E+ +K ++ S + S SK S KPDYIHVRARRGQATDSHSLAER
Sbjct: 9 CKDQKIKRDEEEEESKIEEKHS--EISPNASKVSGSPKPDYIHVRARRGQATDSHSLAER 66
Query: 495 VRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDL 674
RREKIS++MKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS+KLA +NPR D
Sbjct: 67 ARREKISKKMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSLKLATMNPRTDF 126
Query: 675 TSTTCLQK 698
T L K
Sbjct: 127 NLDTFLGK 134
>gi|168056080|ref|XP_001780050.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 160
Score = 161 bits (407), Expect = 4e-038
Identities = 89/139 (64%), Positives = 110/139 (79%), Gaps = 7/139 (5%)
Frame = +3
Query: 261 QNNKAV-AEDDSSDKRMKGCAEEGDSKITEQNSTKNNDRESSADTSKENSK-ASEVQKPD 434
+N+K++ A + +S KR + + E+++++N+ +S + K SK ++ K D
Sbjct: 11 KNSKSLEANEQTSLKRQRSGLVK-----AERSASENSGDSASPRSLKATSKPPQDLSKQD 65
Query: 435 YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSL 614
YIHVRARRGQATDSHSLAERVRREKISERMK+LQDLVPGC+KITGKA MLDEIINYVQSL
Sbjct: 66 YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLDEIINYVQSL 125
Query: 615 QRQVEFLSMKLAAVNPRLD 671
QRQ+EFLSMKLAAVNPRLD
Sbjct: 126 QRQIEFLSMKLAAVNPRLD 144
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 544,304,915,632
Number of Sequences: 7387702
Number of Extensions: 544304915632
Number of Successful Extensions: 309755150
Number of sequences better than 0.0: 0
|