BLASTX 7.6.2
Query= RU24960 /QuerySize=681
(680 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|147767146|emb|CAN75647.1| hypothetical protein [Vitis vinifera] 287 6e-076
gi|124360137|gb|ABN08153.1| Transport protein particle (TRAPP) c... 281 3e-074
gi|157327331|emb|CAO15126.1| unnamed protein product [Vitis vini... 280 8e-074
gi|118483652|gb|ABK93720.1| unknown [Populus trichocarpa] 272 2e-071
gi|15229863|ref|NP_187151.1| transport protein particle (TRAPP) ... 270 1e-070
>gi|147767146|emb|CAN75647.1| hypothetical protein [Vitis vinifera]
Length = 174
Score = 287 bits (733), Expect = 6e-076
Identities = 140/174 (80%), Positives = 156/174 (89%), Gaps = 2/174 (1%)
Frame = +1
Query: 49 MGREVSESCVDSLLTEMVSMYCNRLYANKPELAASRIDAIGYQVGHQLSERYTMERPRFT 228
MGREVSESCV+SLLTEMVS YC R YA+KP+LAA RI+AIGYQVGHQLSERYTMERPRF+
Sbjct: 1 MGREVSESCVESLLTEMVSSYCTRFYADKPDLAARRIEAIGYQVGHQLSERYTMERPRFS 60
Query: 229 DHLDAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLSRMSLDPSAENGDVSQE 408
DHL+AIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDN+FRWLSRMS+DPS EN +Q+
Sbjct: 61 DHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNKFRWLSRMSVDPSPENTGSAQD 120
Query: 409 NSEVSAENKAAQIPNMHLHFSCGVIKGALHNLGIACAVSADTSHLPACSFVVRI 570
S + ENKAAQ +MHL+F CG+I+GAL NLGI CAVSAD S+LPACSFVVRI
Sbjct: 121 PS--TDENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRI 172
>gi|124360137|gb|ABN08153.1| Transport protein particle (TRAPP) component, Bet3
[Medicago truncatula]
Length = 176
Score = 281 bits (718), Expect = 3e-074
Identities = 136/175 (77%), Positives = 153/175 (87%)
Frame = +1
Query: 49 MGREVSESCVDSLLTEMVSMYCNRLYANKPELAASRIDAIGYQVGHQLSERYTMERPRFT 228
M REVSESCVDSL+TEMV+ YCNR YANKPELAA RI+AIGYQVG QLSERYTMERPRF
Sbjct: 1 MVREVSESCVDSLMTEMVACYCNRFYANKPELAARRIEAIGYQVGQQLSERYTMERPRFG 60
Query: 229 DHLDAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLSRMSLDPSAENGDVSQE 408
DHL+AIKFICKDFWSE+FKKQIDNLKTNHRGTFVLQDN+F WL+RMS+DPS +N ++
Sbjct: 61 DHLEAIKFICKDFWSEVFKKQIDNLKTNHRGTFVLQDNKFPWLARMSVDPSTDNVSSVED 120
Query: 409 NSEVSAENKAAQIPNMHLHFSCGVIKGALHNLGIACAVSADTSHLPACSFVVRIK 573
S +AE+KAAQ +MHL+F CG+I+GAL NLGI CAVSAD S LPACSFVVRIK
Sbjct: 121 YSAPTAESKAAQAMSMHLYFPCGIIRGALSNLGIPCAVSADISSLPACSFVVRIK 175
>gi|157327331|emb|CAO15126.1| unnamed protein product [Vitis vinifera]
Length = 170
Score = 280 bits (715), Expect = 8e-074
Identities = 136/170 (80%), Positives = 150/170 (88%), Gaps = 6/170 (3%)
Frame = +1
Query: 49 MGREVSESCVDSLLTEMVSMYCNRLYANKPELAASRIDAIGYQVGHQLSERYTMERPRFT 228
MGREVSESCV+SLLTEMVS YC R YA+KP+LAA RI+AIGYQVGHQLSERYTMERPRF+
Sbjct: 1 MGREVSESCVESLLTEMVSSYCTRFYADKPDLAARRIEAIGYQVGHQLSERYTMERPRFS 60
Query: 229 DHLDAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLSRMSLDPSAENGDVSQE 408
DHL+AIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDN+FRWLSRMS+DPS EN D S +
Sbjct: 61 DHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNKFRWLSRMSVDPSPENTDPSTD 120
Query: 409 NSEVSAENKAAQIPNMHLHFSCGVIKGALHNLGIACAVSADTSHLPACSF 558
ENKAAQ +MHL+F CG+I+GAL NLGI CAVSAD S+LPACSF
Sbjct: 121 ------ENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSF 164
>gi|118483652|gb|ABK93720.1| unknown [Populus trichocarpa]
Length = 169
Score = 272 bits (694), Expect = 2e-071
Identities = 133/169 (78%), Positives = 145/169 (85%), Gaps = 7/169 (4%)
Frame = +1
Query: 49 MGREVSESCVDSLLTEMVSMYCNRLYANKPELAASRIDAIGYQVGHQLSERYTMERPRFT 228
MGREVSESC+DSLLTEMVS YCNR Y+N PELAA RI+AIGYQVGHQLSERYTMERPRFT
Sbjct: 1 MGREVSESCIDSLLTEMVSSYCNRFYSNTPELAARRIEAIGYQVGHQLSERYTMERPRFT 60
Query: 229 DHLDAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLSRMSLDPSAENGDVSQE 408
DHL+AIKFICKDFWSELFKKQIDNLKTNH+GTFVLQDN+FRWLSRMS DPS ENG
Sbjct: 61 DHLEAIKFICKDFWSELFKKQIDNLKTNHKGTFVLQDNKFRWLSRMSGDPSVENG----- 115
Query: 409 NSEVSAENKAAQIPNMHLHFSCGVIKGALHNLGIACAVSADTSHLPACS 555
E+KAAQ +M+L+F CG+I+GAL NLGI CAVSAD S LPACS
Sbjct: 116 --TQDPESKAAQAMSMYLYFPCGIIRGALSNLGIPCAVSADISSLPACS 162
>gi|15229863|ref|NP_187151.1| transport protein particle (TRAPP) component Bet3
family protein [Arabidopsis thaliana]
Length = 173
Score = 270 bits (688), Expect = 1e-070
Identities = 128/173 (73%), Positives = 149/173 (86%), Gaps = 3/173 (1%)
Frame = +1
Query: 49 MGREVSESCVDSLLTEMVSMYCNRLYANKPELAASRIDAIGYQVGHQLSERYTMERPRFT 228
MGREV+ESCVD++L EMV+MY R YANKPELAA RI+AIGYQVGHQLSERYTMERPRF+
Sbjct: 1 MGREVAESCVDTMLMEMVAMYSGRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFS 60
Query: 229 DHLDAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLSRMSLDPSAENGDVSQE 408
DHL+AIKFICKDFWSE+FKKQIDNLKTNHRGTFVLQDN+FRWLSR+S+DPS+EN +
Sbjct: 61 DHLEAIKFICKDFWSEVFKKQIDNLKTNHRGTFVLQDNKFRWLSRVSIDPSSEN---ETQ 117
Query: 409 NSEVSAENKAAQIPNMHLHFSCGVIKGALHNLGIACAVSADTSHLPACSFVVR 567
+ E+KAAQ +M+L+F CG+I+G L NLGI CAVSAD S LP CSFV+R
Sbjct: 118 DPSTPGESKAAQAVSMYLYFPCGIIRGVLSNLGIPCAVSADISSLPTCSFVIR 170
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 544,304,915,632
Number of Sequences: 7387702
Number of Extensions: 544304915632
Number of Successful Extensions: 309755150
Number of sequences better than 0.0: 0
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