BLASTX 7.6.2
Query= RU24982 /QuerySize=1353
(1352 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157353837|emb|CAO46369.1| unnamed protein product [Vitis vini... 364 1e-098
gi|18406414|ref|NP_566004.1| La domain-containing protein [Arabi... 272 5e-071
gi|15724224|gb|AAL06505.1|AF412052_1 At2g43970/F6E13.10 [Arabido... 272 5e-071
gi|62733038|gb|AAX95155.1| At2g43970/F6E13.10 [Oryza sativa (jap... 221 1e-055
gi|115477601|ref|NP_001062396.1| Os08g0542900 [Oryza sativa (jap... 192 9e-047
>gi|157353837|emb|CAO46369.1| unnamed protein product [Vitis vinifera]
Length = 295
Score = 364 bits (933), Expect = 1e-098
Identities = 195/266 (73%), Positives = 213/266 (80%), Gaps = 16/266 (6%)
Frame = +3
Query: 270 LQLLLRNSSKLVVHEDGKKVRRQHPLTQSDMEELQSRIVVAENLPEDHCHQNLMKIFSAA 449
L +LRNS+KLVV EDGKKVRR HPLT+SDMEELQSRIVVAENLPEDHCHQNLMKIFSA
Sbjct: 33 LATVLRNSTKLVVSEDGKKVRRLHPLTESDMEELQSRIVVAENLPEDHCHQNLMKIFSAV 92
Query: 450 GSVKTIRTCQPQTSNSNSSSASRSAKADGMHFSNKLHAFVEYESPELAEKAVAELNDEGN 629
GSVKTIRTCQPQTSN +SSA+RS+K D M FSNKLHAFVEYES ELAEKAV ELNDEGN
Sbjct: 93 GSVKTIRTCQPQTSNGGASSAARSSKTDNMLFSNKLHAFVEYESIELAEKAVVELNDEGN 152
Query: 630 WRSGLRVRLMLKRMSKPGQVRGKKGQDGELQLEEEDASTHEQIHHANEKQSEDSSRQFDA 809
WRSGLRVRLM +R++K Q R +KG +GE EE+DA T EQ+ N+KQ ED D
Sbjct: 153 WRSGLRVRLMHRRVAKSAQARSRKGHEGEAICEEDDACTSEQL--PNDKQPEDP----DV 206
Query: 810 HSHEQ-GEEHGNDKEGGQRKARNRQGGRGKGRGRGQYHH--NNRNHVGTPHNSSIGSSEQ 980
HSHE GEEH NDKEG QRK R+R GRGKGRGRGQYHH N NHVGTP NSSI + EQ
Sbjct: 207 HSHEHAGEEHINDKEGAQRKGRSR--GRGKGRGRGQYHHHGNRGNHVGTPPNSSI-NHEQ 263
Query: 981 PGIGVGVARQPPGPRMPDGTRGFAMG 1058
P VA+ PPGPRMPDGTRGF+MG
Sbjct: 264 P----AVAKPPPGPRMPDGTRGFSMG 285
>gi|18406414|ref|NP_566004.1| La domain-containing protein [Arabidopsis
thaliana]
Length = 545
Score = 272 bits (695), Expect = 5e-071
Identities = 151/264 (57%), Positives = 186/264 (70%), Gaps = 13/264 (4%)
Frame = +3
Query: 198 KDLCQYLLLHLSRRLRPS*VVI---PSLQLLLRNSSKLVVHEDGKKVRRQHPLTQSDMEE 368
KD Y+ +H+ + VI L +L+NS+KL V EDGKKVRR P+T+S +EE
Sbjct: 222 KDPEGYVPIHVVASFKKIKAVINNNSQLAAVLQNSAKLFVSEDGKKVRRISPITESAIEE 281
Query: 369 LQSRIVVAENLPEDHCHQNLMKIFSAAGSVKTIRTCQPQTSNSNSSSASRS-AKADGMHF 545
LQSRI+VAENLPEDHC+QNLMKIFS GSVK IRTCQPQ + S + A+RS AK+DG F
Sbjct: 282 LQSRIIVAENLPEDHCYQNLMKIFSTVGSVKNIRTCQPQNNGSGAPPAARSAAKSDGTLF 341
Query: 546 SNKLHAFVEYESPELAEKAVAELNDEGNWRSGLRVRLMLKRMS---KPGQVRGKKGQDGE 716
SNK+HAFVEYE ELAE+AV EL++ GNWRSGL+VRLMLK + K GQ RG+KG D +
Sbjct: 342 SNKVHAFVEYEIVELAERAVTELSEAGNWRSGLKVRLMLKHQTKEPKQGQGRGRKGHDAD 401
Query: 717 LQLEEEDASTHEQIHHANEKQSEDSSRQFDAHSHEQ--GEEHGNDKEGGQRKARNRQGGR 890
++ EE+DA+T EQ EKQS+D S ++D H EQ GE+ GN+K GQRK RNR GR
Sbjct: 402 VEHEEDDATTSEQ--QPIEKQSDDCSGEWDTHMQEQPIGEDQGNEKAAGQRKGRNR--GR 457
Query: 891 GKGRGRGQYHHNNRNHVGTPHNSS 962
GKGRGRGQ H N + HN +
Sbjct: 458 GKGRGRGQPHQNQNQNNNHSHNQN 481
>gi|15724224|gb|AAL06505.1|AF412052_1 At2g43970/F6E13.10 [Arabidopsis thaliana]
Length = 329
Score = 272 bits (695), Expect = 5e-071
Identities = 151/264 (57%), Positives = 186/264 (70%), Gaps = 13/264 (4%)
Frame = +3
Query: 198 KDLCQYLLLHLSRRLRPS*VVI---PSLQLLLRNSSKLVVHEDGKKVRRQHPLTQSDMEE 368
KD Y+ +H+ + VI L +L+NS+KL V EDGKKVRR P+T+S +EE
Sbjct: 6 KDPEGYVPIHVVASFKKIKAVINNNSQLAAVLQNSAKLFVSEDGKKVRRISPITESAIEE 65
Query: 369 LQSRIVVAENLPEDHCHQNLMKIFSAAGSVKTIRTCQPQTSNSNSSSASRS-AKADGMHF 545
LQSRI+VAENLPEDHC+QNLMKIFS GSVK IRTCQPQ + S + A+RS AK+DG F
Sbjct: 66 LQSRIIVAENLPEDHCYQNLMKIFSTVGSVKNIRTCQPQNNGSGAPPAARSAAKSDGTLF 125
Query: 546 SNKLHAFVEYESPELAEKAVAELNDEGNWRSGLRVRLMLKRMS---KPGQVRGKKGQDGE 716
SNK+HAFVEYE ELAE+AV EL++ GNWRSGL+VRLMLK + K GQ RG+KG D +
Sbjct: 126 SNKVHAFVEYEIVELAERAVTELSEAGNWRSGLKVRLMLKHQTKEPKQGQGRGRKGHDAD 185
Query: 717 LQLEEEDASTHEQIHHANEKQSEDSSRQFDAHSHEQ--GEEHGNDKEGGQRKARNRQGGR 890
++ EE+DA+T EQ EKQS+D S ++D H EQ GE+ GN+K GQRK RNR GR
Sbjct: 186 VEHEEDDATTSEQ--QPIEKQSDDCSGEWDTHMQEQPIGEDQGNEKAAGQRKGRNR--GR 241
Query: 891 GKGRGRGQYHHNNRNHVGTPHNSS 962
GKGRGRGQ H N + HN +
Sbjct: 242 GKGRGRGQPHQNQNQNNNHSHNQN 265
>gi|62733038|gb|AAX95155.1| At2g43970/F6E13.10 [Oryza sativa (japonica
cultivar-group)]
Length = 341
Score = 221 bits (563), Expect = 1e-055
Identities = 130/252 (51%), Positives = 163/252 (64%), Gaps = 18/252 (7%)
Frame = +3
Query: 282 LRNSSKLVVHEDGKKVRRQHPLTQSDMEELQSRIVVAENLPEDHCHQNLMKIFSAAGSVK 461
LR SSKLVV DG +V+R+ P T+SD+EELQ+RIVVAENLP+DHC+QNLMK+FS GSVK
Sbjct: 37 LRTSSKLVVSNDGTRVKREQPFTESDLEELQARIVVAENLPDDHCYQNLMKLFSTVGSVK 96
Query: 462 TIRTCQPQTSNSNSSSASRSAKADGMHFSNKLHAFVEYESPELAEKAVAELNDEGNWRSG 641
TIRTC PQT N +RSAK D M F+NKLHAFVEY++ E AEKA+ ELNDE NWR+G
Sbjct: 97 TIRTCYPQTPNGTGPVTNRSAKLD-MLFANKLHAFVEYDTVEDAEKAIVELNDERNWRNG 155
Query: 642 LRVRLMLKRMSKPGQVRGKKG----QDGELQLEEEDASTHEQIHHANEKQSEDSSRQFDA 809
LRVRL+ M+K G +GKKG DG E+D ST Q +NEK E++ + DA
Sbjct: 156 LRVRLLNTCMTKGG--KGKKGGHDINDG--HGVEDDVSTSNQ---SNEKHGEEALQTPDA 208
Query: 810 HSHEQGEEHGNDKEGGQRKARNRQGGRGKGRGRGQYHHNNR----NHVGTPHNSSIGSSE 977
+ +E D G+ K R R GGRG+GRG YH+NN+ NH H +S +
Sbjct: 209 QGEQLPDESAGDMGRGRGKGRGR-GGRGRGRGY-HYHNNNQQSYHNHQQHNHQNSNNRNA 266
Query: 978 QPGIGVGVARQP 1013
+G + P
Sbjct: 267 AHPVGTPPSNHP 278
>gi|115477601|ref|NP_001062396.1| Os08g0542900 [Oryza sativa (japonica
cultivar-group)]
Length = 427
Score = 192 bits (486), Expect = 9e-047
Identities = 112/255 (43%), Positives = 162/255 (63%), Gaps = 7/255 (2%)
Frame = +3
Query: 267 SLQLLLRNSSKLVVHEDGKKVRRQHPLTQSDMEELQSRIVVAENLPEDHCHQNLMKIFSA 446
+L +LR S++LVV +DGK+VRR+ T++D EE+QSRIVVAENL E+H + NLMKIFSA
Sbjct: 162 ALAAVLRTSAELVVSDDGKRVRRRVLFTEADAEEVQSRIVVAENLREEHRYPNLMKIFSA 221
Query: 447 AGSVKTIRTCQPQTSNSNSSSASRSAKADGMHFSNKLHAFVEYESPELAEKAVAELNDEG 626
GSVK+IRTC PQ + +++ A M F+NK+HAFVEYE+ E AEKAV+E +
Sbjct: 222 FGSVKSIRTCYPQGGIDGAGTSTGKASKIEMLFANKVHAFVEYETVEDAEKAVSEFSSGR 281
Query: 627 NWRSGLRVRLMLKRMSKPGQVRGKKGQDGELQLEEEDASTHEQIHHANEKQSEDSSRQFD 806
+WR G+RVR +L + K +G++G D +E+D T + H + ++ED+S+ +
Sbjct: 282 SWRDGIRVRSLLGCL-KQAMGQGRRGGDEVDAADEDDPETTD---HPQDYETEDASQISE 337
Query: 807 AHSHEQGEEHGNDKEGGQRKARNR-QGGRGKGRGRGQYHHNNRNH-VGTPHNSSIGSSEQ 980
AH Q ++ +DK GG R R R +GGRG+GRG+ H + NH +GTP ++ ++
Sbjct: 338 AHLDHQADDGYHDK-GGMRHGRGRGRGGRGRGRGQYYGHSRDANHPIGTPPSNHSALADH 396
Query: 981 PGIGVGVARQPPGPR 1025
P R P G R
Sbjct: 397 PSKPPPGPRMPDGTR 411
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 544,304,915,632
Number of Sequences: 7387702
Number of Extensions: 544304915632
Number of Successful Extensions: 309755150
Number of sequences better than 0.0: 0
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