BLASTX 7.6.2
Query= RU25388 /QuerySize=707
(706 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|12229897|sp|O48551.2|PSA6_SOYBN RecName: Full=Proteasome subu... 333 1e-089
gi|147797489|emb|CAN73517.1| hypothetical protein [Vitis vinifera] 333 1e-089
gi|12229948|sp|Q9XG77.1|PSA6_TOBAC RecName: Full=Proteasome subu... 331 3e-089
gi|118489185|gb|ABK96399.1| unknown [Populus trichocarpa x Popul... 327 5e-088
gi|118482211|gb|ABK93034.1| unknown [Populus trichocarpa] 325 2e-087
>gi|12229897|sp|O48551.2|PSA6_SOYBN RecName: Full=Proteasome subunit alpha
type-6; AltName: Full=20S proteasome alpha subunit A; AltName: Full=20S
proteasome subunit alpha-1; AltName: Full=Proteasome iota subunit
Length = 246
Score = 333 bits (852), Expect = 1e-089
Identities = 163/188 (86%), Positives = 176/188 (93%)
Frame = +2
Query: 83 MSRGSGGGYDRPIPIFSPEGRLFPVEYAFKAVQSAGITSLGVRGKDSVCVVTPKKVPDQL 262
MSRGSGGGY+R I IFSPEGRLF VEYAFKAV++AGITS+GVRGKDS+CVVT KKVPD+L
Sbjct: 1 MSRGSGGGYNRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSICVVTHKKVPDKL 60
Query: 263 LDPASVTPLFPLTKFLGLLATGMTADARTLVSQARNEAADFRFKNGYEMPVDVLAYWIAN 442
LD SVT LFP+TK+LGLLATGMTADARTLV QARNEAA+FRF GYEMPVDVLA WIA+
Sbjct: 61 LDNTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFTYGYEMPVDVLAKWIAD 120
Query: 443 KSQVYTQHAYMRPLGVVAMVLGVDEETGPQLYKCDPAGHYFGHKATSAGLKEQEAINFLE 622
KSQVYTQHAYMRPLGVVAMVLG+D+E GPQLYKCDPAGHYFGHKATSAGLK+QEAINFLE
Sbjct: 121 KSQVYTQHAYMRPLGVVAMVLGIDDEYGPQLYKCDPAGHYFGHKATSAGLKDQEAINFLE 180
Query: 623 KKMKNDPS 646
KKMKNDPS
Sbjct: 181 KKMKNDPS 188
>gi|147797489|emb|CAN73517.1| hypothetical protein [Vitis vinifera]
Length = 246
Score = 333 bits (852), Expect = 1e-089
Identities = 161/188 (85%), Positives = 177/188 (94%)
Frame = +2
Query: 83 MSRGSGGGYDRPIPIFSPEGRLFPVEYAFKAVQSAGITSLGVRGKDSVCVVTPKKVPDQL 262
MSRGSGGGYDR I IFSPEGRLF VEYAFKAV+++GITS+GVRGKDSVCVVT KKVPD+L
Sbjct: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKASGITSIGVRGKDSVCVVTQKKVPDKL 60
Query: 263 LDPASVTPLFPLTKFLGLLATGMTADARTLVSQARNEAADFRFKNGYEMPVDVLAYWIAN 442
LD SVT LFP+TKFLGLLATGMTADARTLV QARNEAA+FRF+ GYEMPVDVLA WIA+
Sbjct: 61 LDQTSVTHLFPITKFLGLLATGMTADARTLVQQARNEAAEFRFRYGYEMPVDVLARWIAD 120
Query: 443 KSQVYTQHAYMRPLGVVAMVLGVDEETGPQLYKCDPAGHYFGHKATSAGLKEQEAINFLE 622
KSQVYTQHAYMRPLGVVAM+LG+D+E GP+L+KCDPAGH+FGHKATSAGLKEQEAINFLE
Sbjct: 121 KSQVYTQHAYMRPLGVVAMILGIDDENGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE 180
Query: 623 KKMKNDPS 646
KKMKNDP+
Sbjct: 181 KKMKNDPA 188
>gi|12229948|sp|Q9XG77.1|PSA6_TOBAC RecName: Full=Proteasome subunit alpha
type-6; AltName: Full=20S proteasome alpha subunit A; AltName: Full=20S
proteasome subunit alpha-1
Length = 246
Score = 331 bits (848), Expect = 3e-089
Identities = 161/188 (85%), Positives = 176/188 (93%)
Frame = +2
Query: 83 MSRGSGGGYDRPIPIFSPEGRLFPVEYAFKAVQSAGITSLGVRGKDSVCVVTPKKVPDQL 262
MSRGSGGGYDR I IFSPEGRLF VEYAFKAV++AGITS+GVRGKDSVCVVT KKVPD+L
Sbjct: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKL 60
Query: 263 LDPASVTPLFPLTKFLGLLATGMTADARTLVSQARNEAADFRFKNGYEMPVDVLAYWIAN 442
LD SV+ LFP+TK+LGLLATGMTADARTLV QARNEAA+FRFK GYEMPVDVL+ WIA+
Sbjct: 61 LDQTSVSHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFKYGYEMPVDVLSKWIAD 120
Query: 443 KSQVYTQHAYMRPLGVVAMVLGVDEETGPQLYKCDPAGHYFGHKATSAGLKEQEAINFLE 622
KSQVYTQHAYMRPLGVVAM+LG+DEE GPQL+KCDPAGH+FGHKATSAG KEQEAINFLE
Sbjct: 121 KSQVYTQHAYMRPLGVVAMILGIDEEKGPQLFKCDPAGHFFGHKATSAGSKEQEAINFLE 180
Query: 623 KKMKNDPS 646
KKMKNDP+
Sbjct: 181 KKMKNDPA 188
>gi|118489185|gb|ABK96399.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 246
Score = 327 bits (838), Expect = 5e-088
Identities = 161/189 (85%), Positives = 173/189 (91%)
Frame = +2
Query: 83 MSRGSGGGYDRPIPIFSPEGRLFPVEYAFKAVQSAGITSLGVRGKDSVCVVTPKKVPDQL 262
MSRGSGGGYDR I IFSPEGRLF VEYAFKAV++A TS+GVRGKDSVCVVT KKVPD+L
Sbjct: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAATTSIGVRGKDSVCVVTQKKVPDKL 60
Query: 263 LDPASVTPLFPLTKFLGLLATGMTADARTLVSQARNEAADFRFKNGYEMPVDVLAYWIAN 442
LD SVT LFP+TK+LGLLATGMTADAR LV QARNEAA+FRF+ GYEMPVD LA WIA+
Sbjct: 61 LDQTSVTHLFPITKYLGLLATGMTADARNLVQQARNEAAEFRFRYGYEMPVDALARWIAD 120
Query: 443 KSQVYTQHAYMRPLGVVAMVLGVDEETGPQLYKCDPAGHYFGHKATSAGLKEQEAINFLE 622
KSQVYTQHAYMRPLGVVAMVLG+DEE GPQLYK DPAGH+FGHKATSAGLKEQEAINFLE
Sbjct: 121 KSQVYTQHAYMRPLGVVAMVLGIDEENGPQLYKSDPAGHFFGHKATSAGLKEQEAINFLE 180
Query: 623 KKMKNDPSL 649
KKMKNDP+L
Sbjct: 181 KKMKNDPAL 189
>gi|118482211|gb|ABK93034.1| unknown [Populus trichocarpa]
Length = 246
Score = 325 bits (832), Expect = 2e-087
Identities = 158/189 (83%), Positives = 172/189 (91%)
Frame = +2
Query: 83 MSRGSGGGYDRPIPIFSPEGRLFPVEYAFKAVQSAGITSLGVRGKDSVCVVTPKKVPDQL 262
MSRGSG GYDR I IFSPEGRLF VEYAFKAV++A TS+GVRG DSVCVVT KKVPD+L
Sbjct: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKAASTTSIGVRGSDSVCVVTQKKVPDKL 60
Query: 263 LDPASVTPLFPLTKFLGLLATGMTADARTLVSQARNEAADFRFKNGYEMPVDVLAYWIAN 442
LD SVT LFP+TKFLGLLATG+TADAR LV QARNEAA+FRF+ GYEMPVD LA WIA+
Sbjct: 61 LDQTSVTHLFPITKFLGLLATGITADARNLVQQARNEAAEFRFRYGYEMPVDALARWIAD 120
Query: 443 KSQVYTQHAYMRPLGVVAMVLGVDEETGPQLYKCDPAGHYFGHKATSAGLKEQEAINFLE 622
KSQVYTQHAYMRPLGVVAM+LG+DEE GPQLYKCDPAGH++GHKATSAGLKEQEAINFLE
Sbjct: 121 KSQVYTQHAYMRPLGVVAMILGIDEENGPQLYKCDPAGHFYGHKATSAGLKEQEAINFLE 180
Query: 623 KKMKNDPSL 649
KKMKNDP+L
Sbjct: 181 KKMKNDPAL 189
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 544,304,915,632
Number of Sequences: 7387702
Number of Extensions: 544304915632
Number of Successful Extensions: 309755150
Number of sequences better than 0.0: 0
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