BLASTX 7.6.2
Query= RU25412 /QuerySize=483
(482 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|8698895|gb|AAF78513.1|AF195212_1 putative transciption factor... 69 9e-011
gi|157342668|emb|CAO65380.1| unnamed protein product [Vitis vini... 64 2e-009
gi|2104685|emb|CAA66483.1| transcripteion factor [Vicia faba var... 64 3e-009
gi|134054013|gb|ABD28323.2| Excinuclease ABC, C subunit, N-termi... 63 4e-009
>gi|8698895|gb|AAF78513.1|AF195212_1 putative transciption factor [Pyrus
pyrifolia]
Length = 104
Score = 69 bits (166), Expect = 9e-011
Identities = 33/51 (64%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
Frame = +2
Query: 26 KSEALRTERQQLDKYDYAWNKSFNGARRPDDVLQKPKKISSKPT-FSDYAD 175
KS+AL+TE Q LD +DYAWN + NGARRPDDVL+K KKISS T F+++A+
Sbjct: 4 KSDALKTETQLLDTFDYAWNTTINGARRPDDVLRKLKKISSSTTRFANFAE 54
>gi|157342668|emb|CAO65380.1| unnamed protein product [Vitis vinifera]
Length = 547
Score = 64 bits (154), Expect = 2e-009
Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Frame = +2
Query: 143 SSKPTFSD---YADWDGRNLIPQVIKFGRSQPRSVLDGNGITWENTGIWGARTNTGSACR 313
+SKP + D D +L+ +V KFGRSQPR V D G+T G G+ C
Sbjct: 211 ASKPFLQENGLSTDQDINSLLARVFKFGRSQPRLVSDRVGVTGNYNSTCGVALGDGTICE 270
Query: 314 RPPVQGSQRCAVHKGRR 364
RPPV+G +RCA HKG +
Sbjct: 271 RPPVEGRKRCAEHKGMK 287
Score = 62 bits (150), Expect = 6e-009
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +2
Query: 5 RWAPTGTKSEALRTERQQLDKYDYAWNKSFNGARRPDDVLQKPKKISS 148
RWAP +K +A RTE + L +DYAWNK NGARRP DVL+K +K SS
Sbjct: 138 RWAPIESKRDAERTESRLLKTFDYAWNKGSNGARRPSDVLRKLEKTSS 185
>gi|2104685|emb|CAA66483.1| transcripteion factor [Vicia faba var. minor]
Length = 377
Score = 64 bits (153), Expect = 3e-009
Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 5/67 (7%)
Frame = +2
Query: 2 HRWAPTGTKSEALRTERQQLDKYDYAWNKSFNGARRPDDVLQKPKKISS-KPTFSDYADW 178
+RWAP K +AL+TE Q L +DYAWN NG RRP D+LQ KISS TFS+ A
Sbjct: 140 YRWAPMQNKGDALQTESQLLSTFDYAWNTINNGTRRPADILQMLNKISSGTRTFSEVA-- 197
Query: 179 DGRNLIP 199
++L+P
Sbjct: 198 --KSLVP 202
>gi|134054013|gb|ABD28323.2| Excinuclease ABC, C subunit, N-terminal, putative
[Medicago truncatula]
Length = 441
Score = 63 bits (152), Expect = 4e-009
Identities = 31/58 (53%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = +2
Query: 2 HRWAPTGTKSEALRTERQQLDKYDYAWNKSFNGARRPDDVLQKPKKISS-KPTFSDYA 172
+RWAP + +ALRTE Q L +DYAWN NG RRPDD+ Q K++S TFSD A
Sbjct: 201 YRWAPMQNEGDALRTESQLLSTFDYAWNTISNGTRRPDDIHQMLNKLASGTRTFSDVA 258
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 544,304,915,632
Number of Sequences: 7387702
Number of Extensions: 544304915632
Number of Successful Extensions: 309755150
Number of sequences better than 0.0: 0
|